RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 AFAP1L2Q8N4X5 818 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 RIN3Q8TB24 985 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 SMCR8Q8TEV9 937 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 LEO1Q8WVC0 666 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 DDX1Q92499 740 aaKnown RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 LGR4Q9BXB1 951 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 USP40Q9NVE5 1235 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 NDOR1Q9UHB4 597 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 AKT3Q9Y243 479 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 ZNF451Q9Y4E5 1061 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 AFG3L2Q9Y4W6 797 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 ENTPD3O75355 529 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 ADH5P11766 374 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 ITGA4P13612 1032 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 GRIA2P42262 883 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 RNF4P78317 190 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 TCP10Q12799 353 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 GADL1Q6ZQY3 521 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 MFSD2AQ8NA29 543 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 OSBP2Q969R2 916 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 ISL2Q96A47 359 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 IRX2Q9BZI1 471 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.223e-8■■■□□ 15.8
CPSF7-222ENST00000544585 C11orf49Q9H6J7 331 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 PRKRIP1Q9H875 184 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 GNL3LQ9NVN8 582 aaKnown RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 GEMIN8Q9NWZ8 242 aaKnown RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 LRRFIP2Q9Y608 721 aaKnown RBP7.43□□□□□ -1.22
CPSF7-222ENST00000544585 KIF16BQ96L93 1317 aa7.43□□□□□ -1.22
CPSF7-222ENST00000544585 H3BM21 787 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 EFCAB14O75071 495 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 HMGCRP04035 888 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 MAGEA10P43363 369 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 NEK4P51957 841 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 GABREP78334 506 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 SOX4Q06945 474 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 AUHQ13825 339 aaKnown RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 FAM110CQ1W6H9 321 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 TRIM61Q5EBN2 209 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 ACAD11Q709F0 780 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 Q7L0L9 218 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 CCAR1Q8IX12 1150 aaKnown RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 ANKRD13CQ8N6S4 541 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 ZNF513Q8N8E2 541 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 C12orf50Q8NA57 414 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 ADCY4Q8NFM4 1077 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 RCC1LQ96I51 464 aaKnown RBP7.42□□□□□ -1.22
CPSF7-222ENST00000544585 IDI2Q9BXS1 227 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 SUGCTQ9HAC7 445 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 GJD2Q9UKL4 321 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 OGDHLQ9ULD0 1010 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 EMC9Q9Y3B6 208 aa7.42□□□□□ -1.22
CPSF7-222ENST00000544585 BRCA2P51587 3418 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 SZT2Q5T011 3432 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 TBX1O43435 398 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 OIP5O43482 229 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 OPA1O60313 960 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 DNAJC8O75937 253 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-222ENST00000544585 LRIG2O94898 1065 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 MAP4K4O95819 1239 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-222ENST00000544585 APPP05067 770 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 FGFR2P21802 821 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 ASPAP45381 313 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 EPHB1P54762 984 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 RAC1P63000 192 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 NFIAQ12857 509 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 STRN3Q13033 797 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
CPSF7-222ENST00000544585 RABL6Q3YEC7 729 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-222ENST00000544585 LRRC24Q50LG9 513 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 SLC4A10Q6U841 1118 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 UBE3DQ7Z6J8 389 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 FBXO11Q86XK2 927 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 CERS3Q8IU89 383 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 TRIM59Q8IWR1 403 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-222ENST00000544585 VGLL2Q8N8G2 317 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 DIS3LQ8TF46 1054 aaKnown RBP7.41□□□□□ -1.22
CPSF7-222ENST00000544585 LPIN2Q92539 896 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 KAZALD1Q96I82 304 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 SUCLG2Q96I99 432 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 MRGPRX3Q96LB0 322 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 GP6Q9HCN6 339 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 GABBR1Q9UBS5 961 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 FBXL21Q9UKT6 434 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 CEP131Q9UPN4 1083 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 AGTPBP1Q9UPW5 1226 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
CPSF7-222ENST00000544585 PRC1O43663 620 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 WISP1O95388 367 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 NPTXRO95502 500 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 ASLP04424 464 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms