RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PARVGQ9HBI0 331 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 POLD4Q9HCU8 107 aa11.83□□□□□ -0.52
DDB1-221ENST00000543162 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 SFI1A8K8P3 1242 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 ADAMTS4O75173 837 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 F2P00734 622 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
DDB1-221ENST00000543162 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
DDB1-221ENST00000543162 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
DDB1-221ENST00000543162 INSRRP14616 1297 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 ZNF165P49910 485 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 ZNF131P52739 623 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 LBX1P52954 281 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 CHMP4BP1P59074 171 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 NKX3-2P78367 333 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 EHHADHQ08426 723 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 MAPK7Q13164 816 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 STIM1Q13586 685 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 GSE1Q14687 1217 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 MFSD10Q14728 455 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 EMC2Q15006 297 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
DDB1-221ENST00000543162 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 SMYD4Q8IYR2 804 aaPredicted RBP11.82□□□□□ -0.52
DDB1-221ENST00000543162 DAW1Q8N136 415 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 MYCT1Q8N699 235 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 KIFAP3Q92845 792 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 HPS3Q969F9 1004 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 DHX33Q9H6R0 707 aaKnown RBP11.82□□□□□ -0.52
DDB1-221ENST00000543162 SLC39A2Q9NP94 309 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 PDLIM7Q9NR12 457 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 SEL1LQ9UBV2 794 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 GDAQ9Y2T3 454 aa11.82□□□□□ -0.52
DDB1-221ENST00000543162 COL1A2P08123 1366 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 ZBTB42B2RXF5 422 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
DDB1-221ENST00000543162 PPP1R2P41236 205 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 PSEN2P49810 448 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 IGBP1P78318 339 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
DDB1-221ENST00000543162 STK4Q13043 487 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 PPFIA1Q13136 1202 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 KIAA0753Q2KHM9 967 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 RNF180Q86T96 592 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 FAM200AQ8TCP9 573 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 TRAPPC12Q8WVT3 735 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 KAT2BQ92831 832 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 JPH2Q9BR39 696 aaPredicted RBP11.81□□□□□ -0.52
DDB1-221ENST00000543162 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
DDB1-221ENST00000543162 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.81□□□□□ -0.52
DDB1-221ENST00000543162 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 XPNPEP1Q9NQW7 623 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 OLFML3Q9NRN5 406 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
DDB1-221ENST00000543162 MYH11P35749 1972 aa11.81□□□□□ -0.52
DDB1-221ENST00000543162 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 HAS3O00219 553 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 PSMA7O14818 248 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 PLS3P13797 630 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 CST5P28325 142 aaPredicted RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 PRCPP42785 496 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 GRIK4Q16099 956 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 L1TD1Q5T7N2 865 aaKnown RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 KLHL10Q6JEL2 608 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 ADSSL1Q8N142 457 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 PCSK9Q8NBP7 692 aaKnown RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 KIAA0895Q8NCT3 520 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 RNF214Q8ND24 703 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 TMEM143Q96AN5 459 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 IFT74Q96LB3 600 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 BPIFA3Q9BQP9 254 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 POLR3FQ9H1D9 316 aaPredicted RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 MRPL44Q9H9J2 332 aaKnown RBP11.8□□□□□ -0.52
DDB1-221ENST00000543162 C17orf75Q9HAS0 396 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 CBX8Q9HC52 389 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 PCDHA2Q9Y5H9 948 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 PCNTO95613 3336 aa11.8□□□□□ -0.52
DDB1-221ENST00000543162 MAGEB2O15479 319 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 KIF20AO95235 890 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 GCNT3O95395 438 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 C22orf31O95567 290 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms