RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 PRICKLE3O43900 615 aaPredicted RBP5.62□□□□□ -1.51
MDM2-229ENST00000543046 B4GALT4O60513 344 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 MAFO75444 373 aaPredicted RBP5.62□□□□□ -1.51
MDM2-229ENST00000543046 HMGCRP04035 888 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 VIL1P09327 827 aaKnown RBP5.62□□□□□ -1.51
MDM2-229ENST00000543046 ZNF888P0CJ79 500 aaPredicted RBP5.62□□□□□ -1.51
MDM2-229ENST00000543046 KCNQ1P51787 676 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 CTSWP56202 376 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 USP10Q14694 798 aaKnown RBP5.62□□□□□ -1.51
MDM2-229ENST00000543046 UBXN11Q5T124 520 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 GPR158Q5T848 1215 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 KRT26Q7Z3Y9 468 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 PLEKHH3Q7Z736 793 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 TTC1Q99614 292 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 TMX1Q9H3N1 280 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 IFT22Q9H7X7 185 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 Q9UFV3 132 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 CDC42EP3Q9UKI2 254 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 SHROOM4Q9ULL8 1493 aa5.62□□□□□ -1.51
MDM2-229ENST00000543046 NEMP1O14524 444 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 CNGA1P29973 690 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 LSP1P33241 339 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 ID4P47928 161 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 RRADP55042 308 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 PHC1P78364 1004 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 MAP3K12Q12852 859 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 MYBPC3Q14896 1274 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 NOLC1Q14978 699 aaKnown RBP eCLIP5.61□□□□□ -1.51
MDM2-229ENST00000543046 EIF4HQ15056 248 aaKnown RBP5.61□□□□□ -1.51
MDM2-229ENST00000543046 TERF2Q15554 542 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 ATP13A4Q4VNC1 1196 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 ZNF610Q8N9Z0 462 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 POFUT1Q9H488 388 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 CCDC180Q9P1Z9 1646 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
MDM2-229ENST00000543046 SBNO2Q9Y2G9 1366 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 PTPN22Q9Y2R2 807 aa5.61□□□□□ -1.51
MDM2-229ENST00000543046 LOC105371045A0A1W2PR82 267 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 ZEB2O60315 1214 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 PRPF6O94906 941 aaKnown RBP5.6□□□□□ -1.51
MDM2-229ENST00000543046 APOL3O95236 402 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 SURF1Q15526 300 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 DDB1Q16531 1140 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 TIGD7Q6NT04 549 aaPredicted RBP5.6□□□□□ -1.51
MDM2-229ENST00000543046 ARHGEF18Q6ZSZ5 1173 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 RPGRQ92834 1020 aaKnown RBP5.6□□□□□ -1.51
MDM2-229ENST00000543046 SLC5A5Q92911 643 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 MYL10Q9BUA6 226 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 SEMA4AQ9H3S1 761 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 MS4A5Q9H3V2 200 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 USP36Q9P275 1121 aaKnown RBP5.6□□□□□ -1.51
MDM2-229ENST00000543046 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
MDM2-229ENST00000543046 APOBEC2Q9Y235 224 aaKnown RBP5.6□□□□□ -1.51
MDM2-229ENST00000543046 LCHNA4D1U4 455 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 LAMTOR5O43504 91 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 PLATP00750 562 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 STAT5BP51692 787 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 BCAR1P56945 870 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 PPP2CBP62714 309 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 PPP2CAP67775 309 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 ADCY2Q08462 1091 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 TBC1D10BQ4KMP7 808 aaPredicted RBP5.59□□□□□ -1.51
MDM2-229ENST00000543046 ZMAT1Q5H9K5 638 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
MDM2-229ENST00000543046 BROXQ5VW32 411 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 TRIM68Q6AZZ1 485 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 KIAA1841Q6NSI8 718 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 LILRA6Q6PI73 481 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 ZNF662Q6ZS27 426 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 LARP4Q71RC2 724 aaKnown RBP eCLIP5.59□□□□□ -1.51
MDM2-229ENST00000543046 KANSL1Q7Z3B3 1105 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 FILIP1Q7Z7B0 1213 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 RTKN2Q8IZC4 609 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 BCL6BQ8N143 479 aaPredicted RBP5.59□□□□□ -1.51
MDM2-229ENST00000543046 OR5AN1Q8NGI8 311 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 CXorf38Q8TB03 319 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 ZNF496Q96IT1 587 aaPredicted RBP5.59□□□□□ -1.51
MDM2-229ENST00000543046 SPC25Q9HBM1 224 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 SLC4A7Q9Y6M7 1214 aa5.59□□□□□ -1.51
MDM2-229ENST00000543046 ZNF536O15090 1300 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 ELL2O00472 640 aaPredicted RBP5.58□□□□□ -1.52
MDM2-229ENST00000543046 BRINP1O60477 761 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 DNAJC6O75061 913 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 RAB11FIP3O75154 756 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 CPEP16870 476 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 MEOX1P50221 254 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 ANTXR2P58335 489 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 NFKB2Q00653 900 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 PCOLCEQ15113 449 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 DGKDQ16760 1214 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 ZNF827Q17R98 1081 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 ZNF568Q3ZCX4 644 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 UNQ6494/PRO21346Q6UXR6 183 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 ESPNLQ6ZVH7 1005 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 RELTQ969Z4 430 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 BDH2Q9BUT1 245 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 FAM126AQ9BYI3 521 aaPredicted RBP5.58□□□□□ -1.52
MDM2-229ENST00000543046 KIAA1683Q9H0B3 1180 aa5.58□□□□□ -1.52
MDM2-229ENST00000543046 KCMF1Q9P0J7 381 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms