RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
LINC01089-209ENST00000542933 XKR9Q5GH70 373 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 FBXO47Q5MNV8 452 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 TSHZ1Q6ZSZ6 1077 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 DBF4BQ8NFT6 615 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 SEPT8Q92599 483 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 APBB2Q92870 758 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
LINC01089-209ENST00000542933 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
LINC01089-209ENST00000542933 SUGCTQ9HAC7 445 aa17.26■□□□□ 0.35
LINC01089-209ENST00000542933 CXXC1Q9P0U4 656 aaPredicted RBP17.26■□□□□ 0.35
LINC01089-209ENST00000542933 ABHD14A-ACY1A0A1B0GW23 586 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
LINC01089-209ENST00000542933 VTNP04004 478 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 XRCC6P12956 609 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC01089-209ENST00000542933 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
LINC01089-209ENST00000542933 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC01089-209ENST00000542933 POLGP54098 1239 aaPredicted RBP17.25■□□□□ 0.35
LINC01089-209ENST00000542933 IKBKEQ14164 716 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 LPIN1Q14693 890 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 IL17AQ16552 155 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 KRT79Q5XKE5 535 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 SNX29Q8TEQ0 813 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 DHX33Q9H6R0 707 aaKnown RBP17.25■□□□□ 0.35
LINC01089-209ENST00000542933 SLC4A7Q9Y6M7 1214 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 CHD9Q3L8U1 2897 aa17.25■□□□□ 0.35
LINC01089-209ENST00000542933 PTPRSQ13332 1948 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 ZBTB39O15060 712 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 ZSCAN22P10073 491 aaPredicted RBP17.24■□□□□ 0.35
LINC01089-209ENST00000542933 KCNJ6P48051 423 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 RARRES1P49788 294 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 SMAD3P84022 425 aaKnown RBP17.24■□□□□ 0.35
LINC01089-209ENST00000542933 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 FAM173BQ6P4H8 233 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
LINC01089-209ENST00000542933 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 NACC1Q96RE7 527 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 SLC9A7Q96T83 725 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 OSBPL7Q9BZF2 842 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 GINS2Q9Y248 185 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 GBF1Q92538 1859 aa17.24■□□□□ 0.35
LINC01089-209ENST00000542933 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 GPR32O75388 356 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 DGAT1O75907 488 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 CRYBB1P53674 252 aaPredicted RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 NLRP11P59045 1033 aaKnown RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 WDR5P61964 334 aaKnown RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 EMC2Q15006 297 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 TCTN1Q2MV58 587 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 PHOSPHO2Q8TCD6 241 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 AK8Q96MA6 479 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 OSMRQ99650 979 aa17.23■□□□□ 0.35
LINC01089-209ENST00000542933 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
LINC01089-209ENST00000542933 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 F13A1P00488 732 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 ATP2A2P16615 1042 aaKnown RBP17.22■□□□□ 0.35
LINC01089-209ENST00000542933 GPC3P51654 580 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 PAK2Q13177 524 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 DRP2Q13474 957 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 PTPAQ15257 358 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 ODR4Q5SWX8 454 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 FAM43BQ6ZT52 329 aaPredicted RBP17.22■□□□□ 0.35
LINC01089-209ENST00000542933 TCP11Q8WWU5 503 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 MTRQ99707 1265 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
LINC01089-209ENST00000542933 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
LINC01089-209ENST00000542933 ATP6V0A4Q9HBG4 840 aa17.22■□□□□ 0.35
LINC01089-209ENST00000542933 SUCLA2Q9P2R7 463 aaPredicted RBP17.22■□□□□ 0.35
LINC01089-209ENST00000542933 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
LINC01089-209ENST00000542933 CDC25AP30304 524 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 CD52P31358 61 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
LINC01089-209ENST00000542933 PKP1Q13835 747 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 FAM109BQ6ICB4 259 aaPredicted RBP17.21■□□□□ 0.35
LINC01089-209ENST00000542933 GPR153Q6NV75 609 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 ZNF410Q86VK4 478 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 TMEM40Q8WWA1 233 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 PSPC1Q8WXF1 523 aaKnown RBP17.21■□□□□ 0.35
LINC01089-209ENST00000542933 LRCH3Q96II8 777 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
LINC01089-209ENST00000542933 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 FTHL17Q9BXU8 183 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 XPNPEP1Q9NQW7 623 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
LINC01089-209ENST00000542933 DDX19AQ9NUU7 478 aaKnown RBP17.21■□□□□ 0.35
LINC01089-209ENST00000542933 PADI3Q9ULW8 664 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms