RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DPP8Q6V1X1 898 aaPredicted RBP7.18□□□□□ -1.26
XRCC4-206ENST00000542685 REXO1L1PQ8IX06 675 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 DNERQ8NFT8 737 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 GNRHR2Q96P88 292 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 LRRC37BQ96QE4 947 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 LMF1Q96S06 567 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 KATNBL1Q9H079 304 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 KLC2Q9H0B6 622 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 TMPRSS5Q9H3S3 457 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 CD248Q9HCU0 757 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 COQ6Q9Y2Z9 468 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 SLC4A7Q9Y6M7 1214 aa7.18□□□□□ -1.26
XRCC4-206ENST00000542685 CFAP65Q6ZU64 1925 aaKnown RBP7.18□□□□□ -1.26
XRCC4-206ENST00000542685 ROCK2O75116 1388 aaKnown RBP7.18□□□□□ -1.26
XRCC4-206ENST00000542685 WDR62O43379 1518 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 ADCY10Q96PN6 1610 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 C1QTNF3-AMACRE9PGA6 284 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 MATN3O15232 486 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 C4BPAP04003 597 aaKnown RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 TNFRSF1AP19438 455 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 PTGS1P23219 599 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 POLD1P28340 1107 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 FAM50AQ14320 339 aaKnown RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 WDR72Q3MJ13 1102 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 DHX37Q8IY37 1157 aaKnown RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 SLC7A14Q8TBB6 771 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 SECISBP2LQ93073 1101 aaKnown RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 MAGEB10Q96LZ2 347 aaPredicted RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 DNAJC2Q99543 621 aaKnown RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 CARD11Q9BXL7 1154 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 PRKRIP1Q9H875 184 aaPredicted RBP7.17□□□□□ -1.26
XRCC4-206ENST00000542685 INCENPQ9NQS7 918 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 MAGI3Q5TCQ9 1506 aa7.17□□□□□ -1.26
XRCC4-206ENST00000542685 PATE3B3GLJ2 98 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 EFCAB14O75071 495 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 CLASP2O75122 1294 aaKnown RBP7.16□□□□□ -1.26
XRCC4-206ENST00000542685 OFD1O75665 1012 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 AOAHP28039 575 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 MC4RP32245 332 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 RRADP55042 308 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 IRX6P78412 446 aaPredicted RBP7.16□□□□□ -1.26
XRCC4-206ENST00000542685 LACTBP83111 547 aaPredicted RBP7.16□□□□□ -1.26
XRCC4-206ENST00000542685 SEC23AQ15436 765 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 ZNF568Q3ZCX4 644 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 PALM2Q8IXS6 379 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 GSTCDQ8NEC7 633 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 CCDC94Q9BW85 323 aaPredicted RBP7.16□□□□□ -1.26
XRCC4-206ENST00000542685 SEC61A2Q9H9S3 476 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 LAMC1P11047 1609 aa7.16□□□□□ -1.26
XRCC4-206ENST00000542685 SCDO00767 359 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 ZNF623O75123 536 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 ADCY8P40145 1251 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 IL13RA1P78552 427 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 TOP3AQ13472 1001 aaPredicted RBP7.15□□□□□ -1.26
XRCC4-206ENST00000542685 CDSNQ15517 529 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 HS1BP3Q53T59 392 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 SOGA3Q5TF21 947 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 SPRED1Q7Z699 444 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 GALNT8Q9NY28 637 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 SFMBT1Q9UHJ3 866 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 NUDCQ9Y266 331 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 TSC22D4Q9Y3Q8 395 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 NINLQ9Y2I6 1382 aa7.15□□□□□ -1.26
XRCC4-206ENST00000542685 UHRF1BP1Q6BDS2 1440 aa7.15□□□□□ -1.27
XRCC4-206ENST00000542685 ADGRL2O95490 1459 aa7.15□□□□□ -1.27
XRCC4-206ENST00000542685 KDM5DQ9BY66 1539 aa7.15□□□□□ -1.27
XRCC4-206ENST00000542685 KDM6BO15054 1643 aa7.15□□□□□ -1.27
XRCC4-206ENST00000542685 PBRM1Q86U86 1689 aa7.15□□□□□ -1.27
XRCC4-206ENST00000542685 CUTAO60888 179 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 MMEP08473 750 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 MCCP23508 829 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 HERVK_113P62684 666 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 IQGAP2Q13576 1575 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 GIMAP8Q8ND71 665 aaPredicted RBP7.14□□□□□ -1.27
XRCC4-206ENST00000542685 ZSWIM2Q8NEG5 633 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 Q8TCH9 128 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 MKL1Q969V6 931 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 SCLYQ96I15 445 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 WWC2-AS2Q96NR7 200 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 CDK5RAP1Q96SZ6 601 aaKnown RBP7.14□□□□□ -1.27
XRCC4-206ENST00000542685 ANKRD30BQ9BXX2 1392 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 MYH16Q9H6N6 1097 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 UCKL1Q9NWZ5 548 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 TCAF1Q9Y4C2 921 aa7.14□□□□□ -1.27
XRCC4-206ENST00000542685 EPRSP07814 1512 aaKnown RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 RALGAPBQ86X10 1494 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 PLEKHH2Q8IVE3 1493 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 DHX29Q7Z478 1369 aaKnown RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 FOXS1O43638 330 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 HSPA5P11021 654 aaKnown RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 ZSCAN20P17040 1043 aaPredicted RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 KCNQ1P51787 676 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 RAC3P60763 192 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 FAM193AP78312 1265 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 ZXDAP98168 799 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 NOLC1Q14978 699 aaKnown RBP eCLIP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 SF3A1Q15459 793 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms