RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 MAGEC3Q8TD91 643 aa13.39□□□□□ -0.27
KDM3A-216ENST00000542128 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
KDM3A-216ENST00000542128 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
KDM3A-216ENST00000542128 FOXN1O15353 648 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 SPAG7O75391 227 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 RPN1P04843 607 aaKnown RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 POLR2MP0CAP2 368 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 PLCB3Q01970 1234 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 EPHA10Q5JZY3 1008 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 HAUS3Q68CZ6 603 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 MCF2L2Q86YR7 1114 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 MICALL2Q8IY33 904 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 PBKQ96KB5 322 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 CUEDC2Q9H467 287 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 ECEL1O95672 775 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 GJA8P48165 433 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 NR1H4Q96RI1 486 aaPredicted RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 DRC3Q9H069 523 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 RWDD2AQ9UIY3 292 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 I3L4J1 428 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 PRKAB2O43741 272 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 UBOX5O94941 541 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 EEPD1Q7L9B9 569 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 CNOT6LQ96LI5 555 aaKnown RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 NDE1Q9NXR1 346 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 REREQ9P2R6 1566 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 LPXNO60711 386 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 MX2P20592 715 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 KPNB1Q14974 876 aaKnown RBP13.38□□□□□ -0.27
KDM3A-216ENST00000542128 LRRC34Q8IZ02 419 aa13.38□□□□□ -0.27
KDM3A-216ENST00000542128 LAMC1P11047 1609 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 GAS7O60861 476 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 FESP07332 822 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 ITIH3Q06033 890 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 NCAPHQ15003 741 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 APOBEC3FQ8IUX4 373 aaKnown RBP13.37□□□□□ -0.27
KDM3A-216ENST00000542128 CASP10Q92851 521 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 TGS1Q96RS0 853 aaKnown RBP13.37□□□□□ -0.27
KDM3A-216ENST00000542128 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 IL25Q9H293 177 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
KDM3A-216ENST00000542128 CCDC188H7C350 402 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 RAB27AP51159 221 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 METTL16Q86W50 562 aaKnown RBP13.37□□□□□ -0.27
KDM3A-216ENST00000542128 CATSPER2Q96P56 530 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 CRAMP1Q96RY5 1269 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 E2F6O75461 281 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 GH2P01242 217 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 SCNN1BP51168 640 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 WLSQ5T9L3 541 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
KDM3A-216ENST00000542128 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 RPS6KC1Q96S38 1066 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
KDM3A-216ENST00000542128 UNC45AQ9H3U1 944 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 ANLNQ9NQW6 1124 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 ZFP69BQ9UJL9 534 aa13.37□□□□□ -0.27
KDM3A-216ENST00000542128 FAM196BA6NMK8 535 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 MCF2LO15068 1137 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 PALMO75781 387 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 TTLL1O95922 423 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 MED21Q13503 144 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 WDR75Q8IWA0 830 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 RBM41Q96IZ5 413 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 FGFR1OP2Q9NVK5 253 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 TRAF3IP3Q9Y228 551 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 LGR5O75473 907 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 BMP3P12645 472 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 GSTT1P30711 240 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 GJC1P36383 396 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 POLR2FP61218 127 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 SPP2Q13103 211 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 ITIH4Q14624 930 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 RASSF3Q86WH2 238 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms