RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 ARHGEF35A5YM69 484 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 H0YHG0 523 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 OPLAHO14841 1288 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 MESDQ14696 234 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 HS2ST1Q7LGA3 356 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 SLC35C1Q96A29 364 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 ASTN1O14525 1302 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 ZC3H4Q9UPT8 1303 aaKnown RBP14.76□□□□□ -0.05
PTPN1-202ENST00000541713 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 DDX3XO00571 662 aaKnown RBP eCLIP14.76□□□□□ -0.056e-28■■□□□ 12.5
PTPN1-202ENST00000541713 BUB1BO60566 1050 aaPredicted RBP14.76□□□□□ -0.05
PTPN1-202ENST00000541713 TNFAIP3P21580 790 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 RPA1P27694 616 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 ALDH1B1P30837 517 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 CTNNA1P35221 906 aaKnown RBP14.76□□□□□ -0.05
PTPN1-202ENST00000541713 IFFO1Q0D2I5 559 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 GRIPAP1Q4V328 841 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 LENG9Q96B70 501 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 ARHGEF26Q96DR7 871 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 CTTNBP2NLQ9P2B4 639 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 NOC2LQ9Y3T9 749 aaKnown RBP14.76□□□□□ -0.05
PTPN1-202ENST00000541713 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 ZNF233A6NK53 670 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 E7EVH7 732 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 SLITRK3O94933 977 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 KIF4AO95239 1232 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 IVLP07476 585 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 NPEPPSP55786 919 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 DAB2IPQ5VWQ8 1189 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 SYT2Q8N9I0 419 aaPredicted RBP14.75□□□□□ -0.05
PTPN1-202ENST00000541713 TMOD2Q9NZR1 351 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 TARSL2A2RTX5 802 aaKnown RBP14.75□□□□□ -0.05
PTPN1-202ENST00000541713 EBAG9O00559 213 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 TGFB1I1O43294 461 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 FLOT1O75955 427 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 HOXA10P31260 410 aaPredicted RBP14.75□□□□□ -0.05
PTPN1-202ENST00000541713 HNRNPH3P31942 346 aaKnown RBP14.75□□□□□ -0.05
PTPN1-202ENST00000541713 SSR1P43307 286 aaKnown RBP14.75□□□□□ -0.05
PTPN1-202ENST00000541713 USP11P51784 963 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 ZFYVE27Q5T4F4 411 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 VPS36Q86VN1 386 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 PPM1KQ8N3J5 372 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 WDR11Q9BZH6 1224 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 PPP1R9AQ9ULJ8 1098 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 SNX24Q9Y343 169 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 SSU72P8A0A1W2PR75 194 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 RPL13P26373 211 aaKnown RBP14.75□□□□□ -0.05
PTPN1-202ENST00000541713 PAK2Q13177 524 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 PLA2G4FQ68DD2 849 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 CEP63Q96MT8 703 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 LXNQ9BS40 222 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 THAP2Q9H0W7 228 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 FRMD4BQ9Y2L6 1034 aa14.75□□□□□ -0.05
PTPN1-202ENST00000541713 KIAA1551Q9HCM1 1747 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 GOLGA6L10A6NI86 522 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 FOXN3O00409 490 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 PPP1R12BO60237 982 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 OPA1O60313 960 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TUBBP07437 444 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TNNC1P63316 161 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TUBB4BP68371 445 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TRIP13Q15645 432 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 MEI1Q5TIA1 1274 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 NLGN1Q8N2Q7 840 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 IL31RAQ8NI17 732 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 SLC35G2Q8TBE7 412 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 CBWD1Q9BRT8 395 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TESPA1A2RU30 521 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 GCOM1H8Y6P7 765 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 POLR2MP0CAP2 368 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 DLATP10515 647 aaKnown RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 KCNJ1P48048 391 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 MARCKSL1P49006 195 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 PLTPP55058 493 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 MAP2K1Q02750 393 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 SNX1Q13596 522 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 DACT2Q5SW24 774 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TAX1BP1Q86VP1 789 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 USP38Q8NB14 1042 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 SLC30A5Q8TAD4 765 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 MDM1Q8TC05 714 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 MASTLQ96GX5 879 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 RAVER2Q9HCJ3 691 aaKnown RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 TRPC5Q9UL62 973 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 NFIBO00712 420 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 SLC16A4O15374 487 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 HIP1RO75146 1068 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 HARSP12081 509 aaKnown RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 SMARCA1P28370 1054 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 CDK17Q00537 523 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 LARGE2Q8N3Y3 721 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 CTNNBL1Q8WYA6 563 aaPredicted RBP14.74□□□□□ -0.05
PTPN1-202ENST00000541713 ADAM33Q9BZ11 813 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 UNC45AQ9H3U1 944 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms