RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 GBP4Q96PP9 640 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 BOCQ9BWV1 1114 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 SSBP3Q9BWW4 388 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-217ENST00000541578 BTBD2Q9BX70 525 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 UCKL1Q9NWZ5 548 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 TNPO3Q9Y5L0 923 aaKnown RBP5.56□□□□□ -1.52
SNHG1-217ENST00000541578 GSG1L2A8MUP6 293 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 M0R2C6 588 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-217ENST00000541578 MPIG6BO95866 241 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 TOP3AQ13472 1001 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-217ENST00000541578 STILQ15468 1287 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 SLFN13Q68D06 897 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 FSTL4Q6MZW2 842 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 DBX2Q6ZNG2 339 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 OTOP1Q7RTM1 612 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 GPR155Q7Z3F1 870 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 RNF180Q86T96 592 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 CIR1Q86X95 450 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-217ENST00000541578 IFNL2Q8IZJ0 200 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 TTC9BQ8N6N2 239 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 HIPK4Q8NE63 616 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 CHST13Q8NET6 341 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 USP7Q93009 1102 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 WNK4Q96J92 1243 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 AMNQ9BXJ7 453 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 SEC61A2Q9H9S3 476 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 FBXO10Q9UK96 956 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 EID1Q9Y6B2 187 aa5.55□□□□□ -1.52
SNHG1-217ENST00000541578 HMGXB3Q12766 1538 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 PRAMEF22A3QJZ6 481 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 GOLGA6L22H0YM25 854 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 ALDH1L1O75891 902 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
SNHG1-217ENST00000541578 ZBTB48P10074 688 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-217ENST00000541578 SDHAP31040 664 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 ETV4P43268 484 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 MECP2P51608 486 aaKnown RBP5.54□□□□□ -1.52
SNHG1-217ENST00000541578 EPHB1P54762 984 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 IL13RA1P78552 427 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 CC2D1AQ6P1N0 951 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-217ENST00000541578 LRSAM1Q6UWE0 723 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 CCDC146Q8IYE0 955 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 WDR66Q8TBY9 1149 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 MTMR8Q96EF0 704 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 C8orf49Q96NF6 230 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 GPR20Q99678 358 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 ZDHHC5Q9C0B5 715 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 OR10A5Q9H207 317 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 CABP5Q9NP86 173 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 GEMIN8Q9NWZ8 242 aaKnown RBP5.54□□□□□ -1.52
SNHG1-217ENST00000541578 ASB1Q9Y576 335 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 SLC4A7Q9Y6M7 1214 aa5.54□□□□□ -1.52
SNHG1-217ENST00000541578 ATAD2BQ9ULI0 1458 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 RASSF10A6NK89 507 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 PRC1O43663 620 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 BRINP1O60477 761 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 KPNA6O60684 536 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 KRT37O76014 449 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 CNOT4O95628 575 aaKnown RBP5.53□□□□□ -1.52
SNHG1-217ENST00000541578 ZNF888P0CJ79 500 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-217ENST00000541578 SDSP20132 328 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 ADCY8P40145 1251 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 ITKQ08881 620 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 ZNF460Q14592 562 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 ZNF568Q3ZCX4 644 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 CFAP100Q494V2 611 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 CATSPEREQ5SY80 951 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 CHST14Q8NCH0 376 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 BORCS6Q96GS4 357 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 SCYL1Q96KG9 808 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 LMF1Q96S06 567 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 TTC1Q99614 292 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 SMAD5Q99717 465 aaKnown RBP5.53□□□□□ -1.52
SNHG1-217ENST00000541578 PTPN18Q99952 460 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-217ENST00000541578 SLC5A4Q9NY91 659 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 PTPN22Q9Y2R2 807 aa5.53□□□□□ -1.52
SNHG1-217ENST00000541578 THOC2Q8NI27 1593 aaKnown RBP5.53□□□□□ -1.52
SNHG1-217ENST00000541578 NESP48681 1621 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 CCDC194A0A1B0GVG4 234 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 PTPDC1A2A3K4 754 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 TRAF5O00463 557 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 GPR42O15529 346 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 HMGCRP04035 888 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 JMJD7P0C870 316 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 SCNN1BP51168 640 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 KCNQ1P51787 676 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 ADAM17P78536 824 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 CD83Q01151 205 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 EIF4HQ15056 248 aaKnown RBP5.52□□□□□ -1.53
SNHG1-217ENST00000541578 PPP2R5AQ15172 486 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 ZMAT1Q5H9K5 638 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 GORABQ5T7V8 394 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 PIK3R6Q5UE93 754 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 RNF219Q5W0B1 726 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-217ENST00000541578 KANK2Q63ZY3 851 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 OTOP2Q7RTS6 562 aa5.52□□□□□ -1.53
SNHG1-217ENST00000541578 NECAB2Q7Z6G3 386 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms