RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 H3BQV1 296 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 RBAK-RBAKDNI3L0D1 243 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 SLITRK3O94933 977 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 MYOGP15173 224 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 CD52P31358 61 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 YWHABP31946 246 aaKnown RBP14.68□□□□□ -0.06
LTBR-208ENST00000541005 CRYBB1P53674 252 aaPredicted RBP14.68□□□□□ -0.06
LTBR-208ENST00000541005 MTERF2Q49AM1 385 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 LRRC71Q8N4P6 559 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 TMEM40Q8WWA1 233 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 DYDC2Q96IM9 177 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 JPH2Q9BR39 696 aaPredicted RBP14.68□□□□□ -0.06
LTBR-208ENST00000541005 FTHL17Q9BXU8 183 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 ADAMTS10Q9H324 1103 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 STXBP5LQ9Y2K9 1186 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 ATG2AQ2TAZ0 1938 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 K7ELQ4 463 aaPredicted RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 LAD1O00515 517 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 TLL1O43897 1013 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 MAFO75444 373 aaPredicted RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 VTNP04004 478 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 CA3P07451 260 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 RFC5P40937 340 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
LTBR-208ENST00000541005 HTRA4P83105 476 aaPredicted RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 CYP4A11Q02928 519 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 PAK2Q13177 524 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 NBR1Q14596 966 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 KIZQ2M2Z5 673 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 RILPL1Q5EBL4 403 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 LARP1BQ659C4 914 aaKnown RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 PPP2R2DQ66LE6 453 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 EXOC8Q8IYI6 725 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 SP7Q8TDD2 431 aaPredicted RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 LINC01599Q8WXQ3 324 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 TOP1MTQ969P6 601 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 FAM161BQ96MY7 647 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 CDX2Q99626 313 aaPredicted RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 DHX33Q9H6R0 707 aaKnown RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 CDHR5Q9HBB8 845 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 ERVK-5Q9HDB9 667 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.67□□□□□ -0.06
LTBR-208ENST00000541005 PADI3Q9ULW8 664 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 AKT3Q9Y243 479 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 PCDHB6Q9Y5E3 794 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 TRANK1O15050 2925 aa14.67□□□□□ -0.06
LTBR-208ENST00000541005 BRWD1Q9NSI6 2320 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 GAS2O43903 313 aaKnown RBP14.66□□□□□ -0.06
LTBR-208ENST00000541005 SPATA31C1P0DKV0 1188 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 PDCP20941 246 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 PRPHP41219 470 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 GPC3P51654 580 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 CDC42EP1Q00587 391 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 DRP2Q13474 957 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 CTTNQ14247 550 aaKnown RBP14.66□□□□□ -0.06
LTBR-208ENST00000541005 GRIN2CQ14957 1233 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 ODR4Q5SWX8 454 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 MCTP1Q6DN14 999 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 OTUD6AQ7L8S5 288 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 TMCO2Q7Z6W1 182 aaPredicted RBP14.66□□□□□ -0.06
LTBR-208ENST00000541005 MYOCDQ8IZQ8 938 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 CEP170P1Q96L14 293 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 RAD9AQ99638 391 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 OSMRQ99650 979 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 POLR3CQ9BUI4 534 aaPredicted RBP14.66□□□□□ -0.06
LTBR-208ENST00000541005 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
LTBR-208ENST00000541005 SUGCTQ9HAC7 445 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 TUFT1Q9NNX1 390 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 ANKEF1Q9NU02 776 aa14.66□□□□□ -0.06
LTBR-208ENST00000541005 NOC2LQ9Y3T9 749 aaKnown RBP14.66□□□□□ -0.06
LTBR-208ENST00000541005 ENPP3O14638 875 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 RPS6KA5O75582 802 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
LTBR-208ENST00000541005 DNM2P50570 870 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 NPEPPSP55786 919 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 NLRP11P59045 1033 aaKnown RBP14.65□□□□□ -0.06
LTBR-208ENST00000541005 TAP1Q03518 808 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 PTGDRQ13258 359 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 TMEM266Q2M3C6 531 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 ZNF410Q86VK4 478 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 FAM228AQ86W67 206 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 TPH2Q8IWU9 490 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 CRIPAKQ8N1N5 446 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 IGSF22Q8N9C0 903 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 SLC7A3Q8WY07 619 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 ZBED2Q9BTP6 218 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 GINS2Q9Y248 185 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 INSL6Q9Y581 213 aa14.65□□□□□ -0.06
LTBR-208ENST00000541005 MYO7AQ13402 2215 aa14.64□□□□□ -0.07
LTBR-208ENST00000541005 LCHNA4D1U4 455 aa14.64□□□□□ -0.07
LTBR-208ENST00000541005 GPR182O15218 404 aa14.64□□□□□ -0.07
LTBR-208ENST00000541005 ARHGEF15O94989 841 aa14.64□□□□□ -0.07
LTBR-208ENST00000541005 DARSP14868 501 aaKnown RBP14.64□□□□□ -0.07
LTBR-208ENST00000541005 MUTP22033 750 aa14.64□□□□□ -0.07
LTBR-208ENST00000541005 EIF4BP23588 611 aaKnown RBP14.64□□□□□ -0.07
LTBR-208ENST00000541005 RPA1P27694 616 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms