RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 GGPS1O95749 300 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 SGO2Q562F6 1265 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 SCYL1Q96KG9 808 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 USP32Q8NFA0 1604 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 LRRD1A4D1F6 860 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 CYP2B6P20813 491 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 KLRK1P26718 216 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 GBP1P32455 592 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 BRD3Q15059 726 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 HGSO14964 777 aaPredicted RBP15.21■□□□□ 0.03
USP3-204ENST00000540797 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
USP3-204ENST00000540797 CALRP27797 417 aaKnown RBP15.21■□□□□ 0.03
USP3-204ENST00000540797 CIITAP33076 1130 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 CEP85LQ5SZL2 805 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 SDCCAG8Q86SQ7 713 aaPredicted RBP15.21■□□□□ 0.03
USP3-204ENST00000540797 IGDCC4Q8TDY8 1250 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 SPTLC3Q9NUV7 552 aa15.21■□□□□ 0.03
USP3-204ENST00000540797 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 STX2P32856 288 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 SNX1Q13596 522 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 SCN4BQ8IWT1 228 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 PPP1R13BQ96KQ4 1090 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 POLLQ9UGP5 575 aa15.21■□□□□ 0.02
USP3-204ENST00000540797 LLGL1Q15334 1064 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 SLC10A5Q5PT55 438 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 UHMK1Q8TAS1 419 aaKnown RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 EPB41L4AQ9HCS5 686 aaPredicted RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 SLC25A27O95847 323 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 KRT10P13645 584 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 GARSP41250 739 aaKnown RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 ATP2C1P98194 919 aaPredicted RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 DARS2Q6PI48 645 aaKnown RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 ACRBPQ8NEB7 543 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 SLC8A2Q9UPR5 921 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 FTCDO95954 541 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 NR3C2P08235 984 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 ATP1A3P13637 1013 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 PRCPP42785 496 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 MNAT1P51948 309 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 MICALL1Q8N3F8 863 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 SCINQ9Y6U3 715 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 C6orf222P0C671 652 aaPredicted RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 PDHBP11177 359 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 ZNF131P52739 623 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 CDO1Q16878 200 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 ARHGEF18Q6ZSZ5 1173 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 B4GALNT4Q76KP1 1039 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 VSIG1Q86XK7 387 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 ELMOD1Q8N336 334 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 PRDM5Q9NQX1 630 aaPredicted RBP15.2■□□□□ 0.02
USP3-204ENST00000540797 PCDHA13Q9Y5I0 950 aa15.2■□□□□ 0.02
USP3-204ENST00000540797 SOWAHDA6NJG2 315 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 KIF28PB7ZC32 967 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 HIP1RO75146 1068 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 MOCS3O95396 460 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 ALKBH5Q6P6C2 394 aaKnown RBP15.19■□□□□ 0.02
USP3-204ENST00000540797 CCDC62Q6P9F0 684 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 DNAAF3Q8N9W5 541 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 EYA4O95677 639 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 GKAP1Q5VSY0 366 aaPredicted RBP15.19■□□□□ 0.02
USP3-204ENST00000540797 PPP4R1Q8TF05 950 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 STMN2Q93045 179 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 NGRNQ9NPE2 291 aaKnown RBP15.19■□□□□ 0.02
USP3-204ENST00000540797 ESYT2A0FGR8 921 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 EFCAB8A8MWE9 144 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 KBTBD13C9JR72 458 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 VAMP7P51809 220 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 RNF149Q8NC42 400 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 ADAMTS1Q9UHI8 967 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
USP3-204ENST00000540797 GH1P01241 217 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 SAAL1Q96ER3 474 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 RILPQ96NA2 401 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 CDC23Q9UJX2 597 aa15.19■□□□□ 0.02
USP3-204ENST00000540797 BUB1BO60566 1050 aaPredicted RBP15.18■□□□□ 0.02
USP3-204ENST00000540797 PSMA2P25787 234 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 EFNA5P52803 228 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 SREBF2Q12772 1141 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 TMEM270Q6UE05 265 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 SLC4A1P02730 911 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 ECE1P42892 770 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 CYP27A1Q02318 531 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 RPS6KA2Q15349 733 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 PYCARDQ9ULZ3 195 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 NDUFA10O95299 355 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 SRGNP10124 158 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 PDIA5Q14554 519 aa15.18■□□□□ 0.02
USP3-204ENST00000540797 HAUS6Q7Z4H7 955 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms