RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
COLCA1-204ENST00000540738 FAM205AQ6ZU69 1335 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ICAM1P05362 532 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 DDR1Q08345 913 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 YAF2Q8IY57 180 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ACAP3Q96P50 834 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 FAM213AQ9BRX8 229 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ESYT2A0FGR8 921 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 PRKCBP05771 671 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ENOX1Q8TC92 643 aaKnown RBP15.36■□□□□ 0.05
COLCA1-204ENST00000540738 GPRASP2Q96D09 838 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 LCMT1Q9UIC8 334 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 STAG3L1P0CL83 205 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 CYP2C9P11712 490 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 NNMTP40261 264 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 PALM2Q8IXS6 379 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 TMEM63CQ9P1W3 806 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 KCNK3O14649 394 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 KPNA6O60684 536 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 KLRK1P26718 216 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 MTMR3Q13615 1198 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ERCC6LQ2NKX8 1250 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 NBPF12Q5TAG4 269 aaPredicted RBP15.36■□□□□ 0.05
COLCA1-204ENST00000540738 FKBP1CQ5VVH2 108 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 GLB1LQ6UWU2 654 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 TOGARAM2Q6ZUX3 1019 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 ERICH1Q86X53 443 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 EEF2KMTQ96G04 330 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 RIT2Q99578 217 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 TYW1Q9NV66 732 aaKnown RBP15.36■□□□□ 0.05
COLCA1-204ENST00000540738 SCINQ9Y6U3 715 aa15.36■□□□□ 0.05
COLCA1-204ENST00000540738 CTSHP09668 335 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 SUPT20HL2P0C7V6 817 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 MRFAP1L1Q96HT8 127 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.35■□□□□ 0.05
COLCA1-204ENST00000540738 SALL1Q9NSC2 1324 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 POTEFA5A3E0 1075 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 NR3C1P04150 777 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 SKIP12755 728 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
COLCA1-204ENST00000540738 BFSP2Q13515 415 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 C10orf76Q5T2E6 689 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 POTEGQ6S5H5 508 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 POTEEQ6S8J3 1075 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 BZW1Q7L1Q6 419 aaKnown RBP15.35■□□□□ 0.05
COLCA1-204ENST00000540738 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 ZNF148Q9UQR1 794 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 TCP1P17987 556 aaKnown RBP15.35■□□□□ 0.05
COLCA1-204ENST00000540738 RESP18Q5W5W9 173 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 CLEC10AQ8IUN9 316 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 TMEM35BQ8NCS4 154 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 VPS37BQ9H9H4 285 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 PFDN4Q9NQP4 134 aa15.35■□□□□ 0.05
COLCA1-204ENST00000540738 PSMC4P43686 418 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 EVCP57679 992 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 MESDQ14696 234 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 LRRC31Q6UY01 552 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 SMYD4Q8IYR2 804 aaPredicted RBP15.34■□□□□ 0.05
COLCA1-204ENST00000540738 GRAMD1CQ8IYS0 662 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 KIF12Q96FN5 646 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
COLCA1-204ENST00000540738 CACYBPQ9HB71 228 aaKnown RBP15.34■□□□□ 0.05
COLCA1-204ENST00000540738 EHD2Q9NZN4 543 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 SAR1BQ9Y6B6 198 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 SCP2P22307 547 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 ATRIPQ8WXE1 791 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 KRT12Q99456 494 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 SLC38A7Q9NVC3 462 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 KCND2Q9NZV8 630 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 ADCY8P40145 1251 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 CC2D1AQ6P1N0 951 aaPredicted RBP15.34■□□□□ 0.05
COLCA1-204ENST00000540738 MXRA8Q9BRK3 442 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
COLCA1-204ENST00000540738 KRIT1O00522 736 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 TBC1D8O95759 1140 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 CTAGE3PQ8IX95 158 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 CCNYQ8ND76 341 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 CCDC110Q8TBZ0 833 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 OXER1Q8TDS5 423 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 PSMB7Q99436 277 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 NDST4Q9H3R1 872 aa15.34■□□□□ 0.05
COLCA1-204ENST00000540738 EPN1Q9Y6I3 576 aaPredicted RBP15.34■□□□□ 0.05
COLCA1-204ENST00000540738 EPHB1P54762 984 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 SOCS4Q8WXH5 440 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 AGO2Q9UKV8 859 aaKnown RBP15.33■□□□□ 0.05
COLCA1-204ENST00000540738 MROH2AA6NES4 1674 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 C17orf102A2RUQ5 167 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 COASYQ13057 564 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 KNOP1Q1ED39 458 aaKnown RBP15.33■□□□□ 0.05
COLCA1-204ENST00000540738 DUOXA2Q1HG44 320 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 CHADLQ6NUI6 762 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 TADA2BQ86TJ2 420 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 GPD1LQ8N335 351 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 TNIP3Q96KP6 325 aa15.33■□□□□ 0.05
COLCA1-204ENST00000540738 NWD1Q149M9 1564 aa15.33■□□□□ 0.04
COLCA1-204ENST00000540738 DYNC1I1O14576 645 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms