RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PANK2Q9BZ23 570 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 GRPEL1Q9HAV7 217 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 TRMT13Q9NUP7 481 aaKnown RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 SCN5AQ14524 2016 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 TRIM43BA6NCK2 446 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 RRN3P2A6NIE6 340 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 ZBTB42B2RXF5 422 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 SLC26A4O43511 780 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
ATL3-204ENST00000540699 LYPLA2O95372 231 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 OATP04181 439 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 GNAT1P11488 350 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 INSRRP14616 1297 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 UBA7P41226 1012 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 SARSP49591 514 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 MRE11P49959 708 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PSMC5P62195 406 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PRKCEQ02156 737 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 GRB10Q13322 594 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PNOCQ13519 176 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 POSTNQ15063 836 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 TARBP2Q15633 366 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 GRIK4Q16099 956 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PTGISQ16647 500 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 HYIQ5T013 277 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 NCAPH2Q6IBW4 605 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 SASS6Q6UVJ0 657 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 C4orf19Q8IY42 314 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 DHX38Q92620 1227 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 TRIM43Q96BQ3 446 aaPredicted RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 PAGE5Q96GU1 130 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PNMA5Q96PV4 448 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 MTRQ99707 1265 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 RAB34Q9BZG1 259 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PRDM5Q9NQX1 630 aaPredicted RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 SETD4Q9NVD3 440 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 WRAP73Q9P2S5 460 aaPredicted RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 LRWD1Q9UFC0 647 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
ATL3-204ENST00000540699 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
ATL3-204ENST00000540699 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 SLITRK3O94933 977 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 SPATA31C1P0DKV0 1188 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 PLCG1P19174 1290 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 MUTP22033 750 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 ZNF200P98182 395 aaPredicted RBP11.8□□□□□ -0.52
ATL3-204ENST00000540699 PTK7Q13308 1070 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 STX1AQ16623 288 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 TMEM119Q4V9L6 283 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 XKR3Q5GH77 459 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 ZNF484Q5JVG2 852 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 L1TD1Q5T7N2 865 aaKnown RBP11.8□□□□□ -0.52
ATL3-204ENST00000540699 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 GRAMD1CQ8IYS0 662 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 BANK1Q8NDB2 785 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 BADQ92934 168 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 DYDC2Q96IM9 177 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 GUCD1Q96NT3 240 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 CEP89Q96ST8 783 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 LXNQ9BS40 222 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
ATL3-204ENST00000540699 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
ATL3-204ENST00000540699 CUEDC2Q9H467 287 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 ZSWIM4Q9H7M6 989 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 MAGEF1Q9HAY2 307 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 TUFT1Q9NNX1 390 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 RGL1Q9NZL6 768 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 CCDC39Q9UFE4 941 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 PCDHA5Q9Y5H7 936 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
ATL3-204ENST00000540699 A0A087WWV3 80 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 TREHO43280 583 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 CAND2O75155 1236 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 TIMP1P01033 207 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 CYP2C9P11712 490 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 ITGB8P26012 769 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 RPA1P27694 616 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 STAT6P42226 847 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 NLRP12P59046 1061 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 DPYDQ12882 1025 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 SHHQ15465 462 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 C9orf50Q5SZB4 431 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 RRAGBQ5VZM2 374 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 ANO5Q75V66 913 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 CAGE1Q8TC20 777 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 SNX29Q8TEQ0 813 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 WNT8BQ93098 351 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 CCDC34Q96HJ3 373 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 NRBP2Q9NSY0 501 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 BLOC1S4Q9NUP1 217 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms