RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 GCFC2P16383 781 aaKnown RBP23.62■■□□□ 1.37
CHFR-217ENST00000540537 BMPR1AP36894 532 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 CLCN3P51790 818 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 TIGD5Q53EQ6 642 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 PPP4R3AQ6IN85 833 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 EFCAB12Q6NXP0 572 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 CMTR2Q8IYT2 770 aaKnown RBP23.62■■□□□ 1.37
CHFR-217ENST00000540537 MAP7D2Q96T17 732 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 OSMRQ99650 979 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 GJB4Q9NTQ9 266 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 ST3GAL5Q9UNP4 418 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 MUC3AQ02505 3323 aa23.62■■□□□ 1.37
CHFR-217ENST00000540537 TNFRSF10AO00220 468 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 SLC37A4O43826 429 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 SARSP49591 514 aaKnown RBP23.61■■□□□ 1.37
CHFR-217ENST00000540537 NEK4P51957 841 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 NECAB1Q8N987 351 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 OXER1Q8TDS5 423 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 PPP1R16BQ96T49 567 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 UHRF1Q96T88 793 aaPredicted RBP23.61■■□□□ 1.37
CHFR-217ENST00000540537 NAP1L4Q99733 375 aaKnown RBP23.61■■□□□ 1.37
CHFR-217ENST00000540537 C11orf84Q9BUA3 381 aaPredicted RBP23.61■■□□□ 1.37
CHFR-217ENST00000540537 C1orf112Q9NSG2 853 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 AKT3Q9Y243 479 aa23.61■■□□□ 1.37
CHFR-217ENST00000540537 MYO7AQ13402 2215 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 MGEA5O60502 916 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 LARGE1O95461 756 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 FDPSP14324 419 aaKnown RBP23.6■■□□□ 1.37
CHFR-217ENST00000540537 KCNQ1P51787 676 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 TBC1D8BQ0IIM8 1120 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 TARBP2Q15633 366 aaKnown RBP23.6■■□□□ 1.37
CHFR-217ENST00000540537 XKR3Q5GH77 459 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 PIK3AP1Q6ZUJ8 805 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 FAM228AQ86W67 206 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 FAM20AQ96MK3 541 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 NIFKQ9BYG3 293 aaKnown RBP23.6■■□□□ 1.37
CHFR-217ENST00000540537 KCNMB3Q9NPA1 279 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 RGS18Q9NS28 235 aa23.6■■□□□ 1.37
CHFR-217ENST00000540537 RNF216Q9NWF9 866 aaPredicted RBP23.6■■□□□ 1.37
CHFR-217ENST00000540537 DENND3A2RUS2 1198 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 DTNBO60941 627 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 SEC24BO95487 1268 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 LRRC71Q8N4P6 559 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 ADAM2Q99965 735 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 PLVAPQ9BX97 442 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 LMAN2LQ9H0V9 348 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 ADAMTS10Q9H324 1103 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 LRFN2Q9ULH4 789 aa23.59■■□□□ 1.37
CHFR-217ENST00000540537 TBX3O15119 743 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 NLRP11P59045 1033 aaKnown RBP23.58■■□□□ 1.37
CHFR-217ENST00000540537 PPP2R5CQ13362 524 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 SLC24A5Q71RS6 500 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 BANK1Q8NDB2 785 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 NSUN7Q8NE18 718 aaKnown RBP23.58■■□□□ 1.37
CHFR-217ENST00000540537 UBE2ZQ9H832 354 aaPredicted RBP23.58■■□□□ 1.37
CHFR-217ENST00000540537 BRMS1Q9HCU9 246 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 SEPT9Q9UHD8 586 aaPredicted RBP23.58■■□□□ 1.37
CHFR-217ENST00000540537 VAV3Q9UKW4 847 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 PCDHB7Q9Y5E2 793 aa23.58■■□□□ 1.37
CHFR-217ENST00000540537 MRPL42Q9Y6G3 142 aaKnown RBP23.58■■□□□ 1.37
CHFR-217ENST00000540537 KIAA1671Q9BY89 1806 aa23.57■■□□□ 1.36
CHFR-217ENST00000540537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.57■■□□□ 1.36
CHFR-217ENST00000540537 C9IYK1 514 aa23.57■■□□□ 1.36
CHFR-217ENST00000540537 CCNT1O60563 726 aaKnown RBP23.57■■□□□ 1.36
CHFR-217ENST00000540537 STBD1O95210 358 aa23.57■■□□□ 1.36
CHFR-217ENST00000540537 KRT2P35908 639 aa23.57■■□□□ 1.36
CHFR-217ENST00000540537 ATG2AQ2TAZ0 1938 aa23.57■■□□□ 1.36
CHFR-217ENST00000540537 FNDC1Q4ZHG4 1894 aaPredicted RBP23.56■■□□□ 1.36
CHFR-217ENST00000540537 GPC3P51654 580 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 PSMC5P62195 406 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 DSC3Q14574 896 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 MTERF2Q49AM1 385 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 NAALADL2Q58DX5 795 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 TNFRSF25Q93038 417 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 P2RX5Q93086 422 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 CEP89Q96ST8 783 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 NSUN3Q9H649 340 aaKnown RBP23.56■■□□□ 1.36
CHFR-217ENST00000540537 BDP1A6H8Y1 2624 aa23.56■■□□□ 1.36
CHFR-217ENST00000540537 EML1O00423 815 aa23.55■■□□□ 1.36
CHFR-217ENST00000540537 GRM6O15303 877 aa23.55■■□□□ 1.36
CHFR-217ENST00000540537 EIF4BP23588 611 aaKnown RBP23.55■■□□□ 1.36
CHFR-217ENST00000540537 CDC42EP1Q00587 391 aa23.55■■□□□ 1.36
CHFR-217ENST00000540537 NR5A1Q13285 461 aa23.55■■□□□ 1.36
CHFR-217ENST00000540537 PAN2Q504Q3 1202 aaKnown RBP23.55■■□□□ 1.36
CHFR-217ENST00000540537 TCEAL5Q5H9L2 206 aa23.55■■□□□ 1.36
CHFR-217ENST00000540537 EARS2Q5JPH6 523 aaKnown RBP23.55■■□□□ 1.36
CHFR-217ENST00000540537 HAS1Q92839 578 aa23.55■■□□□ 1.36
CHFR-217ENST00000540537 IGKV6-21A0A0C4DH24 114 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 DDX11L8A8MPP1 907 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 JAK2O60674 1132 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 DKC1O60832 514 aaKnown RBP eCLIP23.54■■□□□ 1.36
CHFR-217ENST00000540537 DARSP14868 501 aaKnown RBP23.54■■□□□ 1.36
CHFR-217ENST00000540537 GATMP50440 423 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 FAM189BP81408 668 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 SCLT1Q96NL6 688 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 ELAC1Q9H777 363 aaKnown RBP23.54■■□□□ 1.36
CHFR-217ENST00000540537 TMEM161AQ9NX61 479 aa23.54■■□□□ 1.36
CHFR-217ENST00000540537 TMEM150BA6NC51 233 aa23.53■■□□□ 1.36
CHFR-217ENST00000540537 FAM205CA6NFA0 338 aa23.53■■□□□ 1.36
CHFR-217ENST00000540537 MMP1P03956 469 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms