RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 PPP4R3AQ6IN85 833 aa14.8□□□□□ -0.04
SEMA4D-223ENST00000540475 CKAP2LQ8IYA6 745 aa14.8□□□□□ -0.04
SEMA4D-223ENST00000540475 C11orf84Q9BUA3 381 aaPredicted RBP14.8□□□□□ -0.04
SEMA4D-223ENST00000540475 ADAMTS10Q9H324 1103 aa14.8□□□□□ -0.04
SEMA4D-223ENST00000540475 C1orf112Q9NSG2 853 aa14.8□□□□□ -0.04
SEMA4D-223ENST00000540475 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
SEMA4D-223ENST00000540475 IGKV6-21A0A0C4DH24 114 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 GRM6O15303 877 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 TDP2O95551 362 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 CTNNB1P35222 781 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 NFX1Q12986 1120 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 CAMK1Q14012 370 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 ANKRD1Q15327 319 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 UGCGQ16739 394 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 TMEM266Q2M3C6 531 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 CTC1Q2NKJ3 1217 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 EFCAB12Q6NXP0 572 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 SLC24A5Q71RS6 500 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 KRT25Q7Z3Z0 450 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 FAM228AQ86W67 206 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 PABPC5Q96DU9 382 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 NECAB3Q96P71 396 aaPredicted RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 SLKQ9H2G2 1235 aaPredicted RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 NSUN3Q9H649 340 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 KCNMB3Q9NPA1 279 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 SAMM50Q9Y512 469 aa14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 MRPL42Q9Y6G3 142 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-223ENST00000540475 NCK2O43639 380 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 MMP1P03956 469 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 VTNP04004 478 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 TMOD1P28289 359 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 PRKCEQ02156 737 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 KIZQ2M2Z5 673 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 TCEAL5Q5H9L2 206 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 METTL13Q8N6R0 699 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 GJA10Q969M2 543 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 FAM20AQ96MK3 541 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 OSMRQ99650 979 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 ADAM2Q99965 735 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 KCNJ14Q9UNX9 436 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 PLAGL2Q9UPG8 496 aa14.78□□□□□ -0.04
SEMA4D-223ENST00000540475 FDPSP14324 419 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 EIF4BP23588 611 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 AK2P54819 239 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 NLRP11P59045 1033 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 CDC42EP1Q00587 391 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 PPP2R5CQ13362 524 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 PUS10Q3MIT2 529 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 XKR3Q5GH77 459 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 MIER3Q7Z3K6 550 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 SPPL3Q8TCT6 385 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 DDX25Q9UHL0 483 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 VAV3Q9UKW4 847 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 PCDHB7Q9Y5E2 793 aa14.77□□□□□ -0.05
SEMA4D-223ENST00000540475 GRXCR2A6NFK2 248 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 TBX3O15119 743 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 SLC37A4O43826 429 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 GCFC2P16383 781 aaKnown RBP14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 XBP1P17861 261 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 LTBRP36941 435 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 GPC3P51654 580 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 CLCN3P51790 818 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 ME3Q16798 604 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 INF2Q27J81 1249 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 NEK8Q86SG6 692 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 TNFRSF25Q93038 417 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 MAP7D2Q96T17 732 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 TMEM161AQ9NX61 479 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 GINS2Q9Y248 185 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 ARID2Q68CP9 1835 aa14.76□□□□□ -0.05
SEMA4D-223ENST00000540475 DENND3A2RUS2 1198 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 CHMP2AO43633 222 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 MAFO75444 373 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 ITGB1P05556 798 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 KCNA5P22460 613 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 DNAJB1P25685 340 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 GATMP50440 423 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 FAM102BQ5T8I3 360 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 TRMT1LQ7Z2T5 733 aaKnown RBP14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 FAM178BQ8IXR5 827 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 LRRC71Q8N4P6 559 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 OXER1Q8TDS5 423 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 WASF1Q92558 559 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 HAS1Q92839 578 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 GTF3C6Q969F1 213 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 NAP1L4Q99733 375 aaKnown RBP14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 GJB4Q9NTQ9 266 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 LRFN2Q9ULH4 789 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 AKT3Q9Y243 479 aa14.75□□□□□ -0.05
SEMA4D-223ENST00000540475 CCDC194A0A1B0GVG4 234 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 EML1O00423 815 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 DARSP14868 501 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 PSMC5P62195 406 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 UBE3AQ05086 875 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 TBC1D8BQ0IIM8 1120 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 HYAL1Q12794 435 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms