RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 A0A087WUV0 522 aaPredicted RBP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 TRIM66O15016 1216 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CLIC2O15247 247 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 TBC1D12O60347 775 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 MYCLP12524 364 aaPredicted RBP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 PLTPP55058 493 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 KRT26Q7Z3Y9 468 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 TAB3Q8N5C8 712 aaPredicted RBP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 IQCDQ96DY2 449 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 SUGCTQ9HAC7 445 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 SYNPO2Q9UMS6 1093 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 PCDHA13Q9Y5I0 950 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CD2APQ9Y5K6 639 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 MRFAP1Q9Y605 127 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 KLRC4O43908 158 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 GAS7O60861 476 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 TBC1D8O95759 1140 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 EGFRP00533 1210 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 KIFAP3Q92845 792 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 CEP63Q96MT8 703 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 JPH2Q9BR39 696 aaPredicted RBP10.84□□□□□ -0.67
TRAF1-202ENST00000540010 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 FAM184BQ9ULE4 1060 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 AGTPBP1Q9UPW5 1226 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 PVALEFA0A1B0GWK0 134 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 EIF3CLB5ME19 914 aaKnown RBP10.84□□□□□ -0.67
TRAF1-202ENST00000540010 LRRN2O75325 713 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 GNA14O95837 355 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 ATP5DP30049 168 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 SREBF1P36956 1147 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 SEMA3FQ13275 785 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 KIAA1755Q5JYT7 1200 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 EFCAB13Q8IY85 973 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 PPM1KQ8N3J5 372 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 PRPF38AQ8NAV1 312 aaKnown RBP10.84□□□□□ -0.67
TRAF1-202ENST00000540010 RIN2Q8WYP3 895 aaPredicted RBP10.84□□□□□ -0.67
TRAF1-202ENST00000540010 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 EIF3CQ99613 913 aaKnown RBP10.84□□□□□ -0.67
TRAF1-202ENST00000540010 THAP9Q9H5L6 903 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 GOLGB1Q14789 3259 aaKnown RBP10.84□□□□□ -0.67
TRAF1-202ENST00000540010 ZBED4O75132 1171 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 SPP2Q13103 211 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 WRNIP1Q96S55 665 aa10.84□□□□□ -0.67
TRAF1-202ENST00000540010 PMS1P54277 932 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 DHX9Q08211 1270 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MESDQ14696 234 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ANGEL2Q5VTE6 544 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 KCNK18Q7Z418 384 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 FAM178BQ8IXR5 827 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 STMN2Q93045 179 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MAGOHBQ96A72 148 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MLXIPQ9HAP2 919 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 LIMA1Q9UHB6 759 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 CTNND1O60716 968 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MTMR2Q13614 643 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 NBPF12Q5TAG4 269 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 HHATQ5VTY9 493 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ABCB11O95342 1321 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 FAM86B1E9PN63 330 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 FAM86B2P0C5J1 330 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 SMTNP53814 917 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 CYP2W1Q8TAV3 490 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 LRRC15Q8TF66 581 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 AS3MTQ9HBK9 375 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 HOMER3Q9NSC5 361 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ASTN2O75129 1339 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 GAS8O95995 478 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MYCNP04198 464 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 PEX19P40855 299 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 TRIM68Q6AZZ1 485 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 DCUN1D2Q6PH85 259 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 PPP1R21Q6ZMI0 780 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 APBB1IPQ7Z5R6 666 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 ZNF577Q9BSK1 485 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 VPS37BQ9H9H4 285 aa10.83□□□□□ -0.68
TRAF1-202ENST00000540010 INTS9Q9NV88 658 aaKnown RBP10.83□□□□□ -0.68
TRAF1-202ENST00000540010 WDR46O15213 610 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms