RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SP2Q02086 613 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 PKN2Q16513 984 aaKnown RBP13.01□□□□□ -0.33
VTN-202ENST00000539746 FAM102BQ5T8I3 360 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 RNF180Q86T96 592 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 RSPH3Q86UC2 560 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
VTN-202ENST00000539746 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 NELFBQ8WX92 580 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
VTN-202ENST00000539746 KCNN1Q92952 543 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 P2RX5Q93086 422 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 DNAJC19Q96DA6 116 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 ACCSQ96QU6 501 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 TBC1D7Q9P0N9 293 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 CASP8AP2Q9UKL3 1982 aa13.01□□□□□ -0.33
VTN-202ENST00000539746 H3BRB1 525 aa13□□□□□ -0.33
VTN-202ENST00000539746 PDXKO00764 312 aa13□□□□□ -0.33
VTN-202ENST00000539746 CETN3O15182 167 aa13□□□□□ -0.33
VTN-202ENST00000539746 KLRC4O43908 158 aa13□□□□□ -0.33
VTN-202ENST00000539746 PEX10O60683 326 aa13□□□□□ -0.33
VTN-202ENST00000539746 USO1O60763 962 aaKnown RBP13□□□□□ -0.33
VTN-202ENST00000539746 HIP1RO75146 1068 aa13□□□□□ -0.33
VTN-202ENST00000539746 GCNT3O95395 438 aa13□□□□□ -0.33
VTN-202ENST00000539746 LGALS2P05162 132 aa13□□□□□ -0.33
VTN-202ENST00000539746 PRR29P0C7W0 189 aa13□□□□□ -0.33
VTN-202ENST00000539746 NAMPTP43490 491 aa13□□□□□ -0.33
VTN-202ENST00000539746 NKX3-2P78367 333 aa13□□□□□ -0.33
VTN-202ENST00000539746 POU5F1BQ06416 359 aa13□□□□□ -0.33
VTN-202ENST00000539746 EMC2Q15006 297 aa13□□□□□ -0.33
VTN-202ENST00000539746 NFIL3Q16649 462 aa13□□□□□ -0.33
VTN-202ENST00000539746 BMT2Q1RMZ1 405 aa13□□□□□ -0.33
VTN-202ENST00000539746 UTP14CQ5TAP6 766 aaKnown RBP13□□□□□ -0.33
VTN-202ENST00000539746 ANO5Q75V66 913 aa13□□□□□ -0.33
VTN-202ENST00000539746 FMNL3Q8IVF7 1028 aa13□□□□□ -0.33
VTN-202ENST00000539746 CSGALNACT2Q8N6G5 542 aa13□□□□□ -0.33
VTN-202ENST00000539746 AOPEPQ8N6M6 819 aa13□□□□□ -0.33
VTN-202ENST00000539746 ARRDC4Q8NCT1 418 aa13□□□□□ -0.33
VTN-202ENST00000539746 DEPTORQ8TB45 409 aa13□□□□□ -0.33
VTN-202ENST00000539746 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
VTN-202ENST00000539746 INO80BQ9C086 356 aaPredicted RBP13□□□□□ -0.33
VTN-202ENST00000539746 KATNBL1Q9H079 304 aa13□□□□□ -0.33
VTN-202ENST00000539746 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
VTN-202ENST00000539746 METTL14Q9HCE5 456 aaKnown RBP13□□□□□ -0.33
VTN-202ENST00000539746 KIAA1586Q9HCI6 787 aa13□□□□□ -0.33
VTN-202ENST00000539746 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
VTN-202ENST00000539746 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 STX10O60499 249 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 MMP3P08254 477 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 ZNF865P0CJ78 1059 aaPredicted RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 CYBAP13498 195 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 SMPD1P17405 629 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 CNGA1P29973 690 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 GJA9P57773 515 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 PRKCZQ05513 592 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 EHHADHQ08426 723 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 ECM1Q16610 540 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 KYAT1Q16773 422 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 MTERF2Q49AM1 385 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 SLFN12LQ6IEE8 588 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 KCNK18Q7Z418 384 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 NME8Q8N427 588 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 RNF214Q8ND24 703 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 AFG1LQ8WV93 481 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 STAMQ92783 540 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 GBP3Q9H0R5 595 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 DHX33Q9H6R0 707 aaKnown RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 KMT5AQ9NQR1 393 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 GNEQ9Y223 722 aaKnown RBP12.99□□□□□ -0.33
VTN-202ENST00000539746 FRMD4BQ9Y2L6 1034 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 NFE2L3Q9Y4A8 694 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 PLXNA1Q9UIW2 1896 aa12.99□□□□□ -0.33
VTN-202ENST00000539746 MOXD2PA6NHM9 499 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 K7ENM7 598 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 M0QZ92 97 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 FOXN1O15353 648 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 CYP2C19P33261 490 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 PRCPP42785 496 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 PSMC6P62333 389 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 ENPEPQ07075 957 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms