RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MSH2P43246 934 aa15.64■□□□□ 0.1
CACNB1-206ENST00000539338 PDCLQ13371 301 aa15.64■□□□□ 0.1
CACNB1-206ENST00000539338 SCARA5Q6ZMJ2 495 aa15.64■□□□□ 0.1
CACNB1-206ENST00000539338 ARHGEF18Q6ZSZ5 1173 aa15.64■□□□□ 0.1
CACNB1-206ENST00000539338 PPP1R16BQ96T49 567 aa15.64■□□□□ 0.1
CACNB1-206ENST00000539338 ZCCHC17Q9NP64 241 aaKnown RBP15.64■□□□□ 0.1
CACNB1-206ENST00000539338 CCL15-CCL14A0A0B4J2E2 113 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 CCL15Q16663 113 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 GRM4Q14833 912 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 TBC1D9BQ66K14 1250 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 SCYL3Q8IZE3 742 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 IL25Q9H293 177 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 BCAP29Q9UHQ4 241 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 MAGED2Q9UNF1 606 aaPredicted RBP15.64■□□□□ 0.09
CACNB1-206ENST00000539338 MCF2LO15068 1137 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 NR3C1P04150 777 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 GMPSP49915 693 aaPredicted RBP15.64■□□□□ 0.09
CACNB1-206ENST00000539338 KCNH2Q12809 1159 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 SEPT6Q14141 434 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 KLHL29Q96CT2 875 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 SNX24Q9Y343 169 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 RCAN1P53805 252 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 CNOT10Q9H9A5 744 aaKnown RBP15.64■□□□□ 0.09
CACNB1-206ENST00000539338 CNTNAP4Q9C0A0 1308 aa15.64■□□□□ 0.09
CACNB1-206ENST00000539338 OPHN1O60890 802 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 GGCXP38435 758 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 CUL1Q13616 776 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 BANK1Q8NDB2 785 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 ELP3Q9H9T3 547 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 CD209Q9NNX6 404 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 GGA3Q9NZ52 723 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 TULP4Q9NRJ4 1543 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 IQGAP1P46940 1657 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 EXOC1LA0A1B0GW35 172 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 WDR91A4D1P6 747 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 GSTA1P08263 222 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 GSTA2P09210 222 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 C1orf228Q6PIY5 440 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 TNS4Q8IZW8 715 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 C7orf31Q8N865 590 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 ESYT3A0FGR9 886 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 FAM205CA6NFA0 338 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 HOXA7P31268 230 aaPredicted RBP15.63■□□□□ 0.09
CACNB1-206ENST00000539338 GARSP41250 739 aaKnown RBP15.63■□□□□ 0.09
CACNB1-206ENST00000539338 ARHGAP4P98171 946 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 RABL6Q3YEC7 729 aaPredicted RBP15.63■□□□□ 0.09
CACNB1-206ENST00000539338 MAP3K21Q5TCX8 1036 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 DARS2Q6PI48 645 aaKnown RBP15.63■□□□□ 0.09
CACNB1-206ENST00000539338 STAG2Q8N3U4 1231 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 KCTD6Q8NC69 237 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 CCNYQ8ND76 341 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 WDR24Q96S15 920 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 CPP00450 1065 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 FCER1AP12319 257 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 SERPINB6P35237 376 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 GCKP35557 465 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 RWDD2BP57060 319 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 FAM83BQ5T0W9 1011 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 BARHL2Q9NY43 387 aa15.63■□□□□ 0.09
CACNB1-206ENST00000539338 FBXO2Q9UK22 296 aaPredicted RBP15.63■□□□□ 0.09
CACNB1-206ENST00000539338 PVALEFA0A1B0GWK0 134 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 HMGB1P1B2RPK0 211 aaPredicted RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 APLP1P51693 650 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 PDXDC2PQ6P474 469 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 ELMOD1Q8N336 334 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 TAF6LQ9Y6J9 622 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 TDP2O95551 362 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 CRKP46108 304 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 GCLMP48507 274 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 NOGQ13253 232 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 DCLK2Q8N568 766 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 FAM81BQ96LP2 452 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 UTYO14607 1347 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 POTEFA5A3E0 1075 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 SART1O43290 800 aaKnown RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 BBS9Q3SYG4 887 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 POTEGQ6S5H5 508 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 POTEEQ6S8J3 1075 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 RHOT2Q8IXI1 618 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 PROM2Q8N271 834 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 ANO9A1A5B4 782 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 CA12O43570 354 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 PSAPP07602 524 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 SRGAP2CP0DJJ0 459 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 STAT3P40763 770 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 ATP2C1P98194 919 aaPredicted RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 OR6B2Q6IFH4 312 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 ARRDC4Q8NCT1 418 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 DCAF4Q8WV16 495 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 MTA3Q9BTC8 594 aa15.62■□□□□ 0.09
CACNB1-206ENST00000539338 IRX2Q9BZI1 471 aaPredicted RBP15.62■□□□□ 0.09
CACNB1-206ENST00000539338 CCDC188H7C350 402 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms