RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SIDT1Q9NXL6 827 aaKnown RBP1.38□□□□□ -2.19
HIF1A-204ENST00000539097 SLC5A4Q9NY91 659 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FBXL21Q9UKT6 434 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 TCFL5Q9UL49 500 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 ZDHHC9Q9Y397 364 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 RIPOR2Q9Y4F9 1068 aa1.38□□□□□ -2.19
HIF1A-204ENST00000539097 FAM95CA0A1B0GW59 222 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 GNAT3A8MTJ3 354 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 FADS2P1A8MWK0 482 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DIRC3C9JPN6 131 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 BIN1O00499 593 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DDX3XO00571 662 aaKnown RBP eCLIP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MAN2B1O00754 1011 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 APAF1O14727 1248 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PRC1O43663 620 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SLC5A1P13866 664 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 EDNRBP24530 442 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PSMA4P25789 261 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SMAD3P84022 425 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KLF1Q13351 362 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 UBE4AQ14139 1066 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TARBP2Q15633 366 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SMAD2Q15796 467 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CATSPEREQ5SY80 951 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SYDE2Q5VT97 1194 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TAS1R1Q7RTX1 841 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CCDC146Q8IYE0 955 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KIAA0319LQ8IZA0 1049 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 UNC5BQ8IZJ1 945 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PLEKHO2Q8TD55 490 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MORC4Q8TE76 937 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CLEC4DQ8WXI8 215 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ZDHHC12Q96GR4 267 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 WNK4Q96J92 1243 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DCAF5Q96JK2 942 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 HHIPL1Q96JK4 782 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ALG1Q9BT22 464 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 BTBD2Q9BX70 525 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KCNF1Q9H3M0 494 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CABP5Q9NP86 173 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DMRT3Q9NQL9 472 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TMPRSS11EQ9UL52 423 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ACOT7O00154 380 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SART1O43290 800 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KRT37O76014 449 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 INMTO95050 263 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 FOSL1P15407 271 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MC4RP32245 332 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MAN1A1P33908 653 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 NEK3P51956 506 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 NRG3P56975 720 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 FAM193AP78312 1265 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 BNIP3Q12983 259 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PPP2R5AQ15172 486 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 NFKBIBQ15653 356 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TRIM71Q2Q1W2 868 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM95Q3KNT9 176 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ARL6IP4Q66PJ3 421 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 NAIF1Q69YI7 327 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 WAPLQ7Z5K2 1190 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 RALYLQ86SE5 291 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 NLRX1Q86UT6 975 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PHYKPLQ8IUZ5 450 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DENND1CQ8IV53 801 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SIRT2Q8IXJ6 389 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CCDC105Q8IYK2 499 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SDR16C5Q8N3Y7 309 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CYP2W1Q8TAV3 490 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 JPH3Q8WXH2 748 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 GFM2Q969S9 779 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF668Q96K58 619 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PPP1R16BQ96T49 567 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TTC1Q99614 292 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SLC6A17Q9H1V8 727 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SSU72Q9NP77 194 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KCNH7Q9NS40 1196 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DENND2AQ9ULE3 1009 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ERCC6L2Q5T890 1561 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CUX2O14529 1486 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SLC12A8A0AV02 714 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 OR2W5A6NFC9 320 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PSPNO60542 156 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CNOT4O95628 575 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ZSCAN20P17040 1043 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KRT15P19012 456 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MTNR1BP49286 362 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 DNM2P50570 870 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 AGFG1P52594 562 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 RHBDL3P58872 404 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SP140Q13342 867 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TERF2Q15554 542 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 CRY1Q16526 586 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ZFYVE27Q5T4F4 411 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 IL31Q6EBC2 164 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PAQR3Q6TCH7 311 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 HTR3DQ70Z44 454 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 HDGFL2Q7Z4V5 671 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MTDHQ86UE4 582 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TICAM1Q8IUC6 712 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MFSD4AQ8N468 514 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms