RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 KPNA6O60684 536 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
VAMP1-207ENST00000539047 ELNP15502 786 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 NPEPPSP55786 919 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 TBC1D8BQ0IIM8 1120 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 FAM102BQ5T8I3 360 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 DHTKD1Q96HY7 919 aaPredicted RBP17.06■□□□□ 0.32
VAMP1-207ENST00000539047 PCYT2Q99447 389 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 KATNAL1Q9BW62 490 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 MRPL44Q9H9J2 332 aaKnown RBP17.06■□□□□ 0.32
VAMP1-207ENST00000539047 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 TRIM17Q9Y577 477 aa17.06■□□□□ 0.32
VAMP1-207ENST00000539047 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 CCDC85CA6NKD9 419 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 IKBKBO14920 756 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 ZNF286BP0CG31 522 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 HOXD8P13378 290 aaPredicted RBP17.05■□□□□ 0.32
VAMP1-207ENST00000539047 ABCD1P33897 745 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 CACNB2Q08289 660 aaPredicted RBP17.05■□□□□ 0.32
VAMP1-207ENST00000539047 ALCAMQ13740 583 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 EMC2Q15006 297 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 TMEM63BQ5T3F8 832 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 FAM178BQ8IXR5 827 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 SMYD4Q8IYR2 804 aaPredicted RBP17.05■□□□□ 0.32
VAMP1-207ENST00000539047 MYOCDQ8IZQ8 938 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 IFT74Q96LB3 600 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 TSG101Q99816 390 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 C17orf75Q9HAS0 396 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 SLC39A2Q9NP94 309 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 OLFML3Q9NRN5 406 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
VAMP1-207ENST00000539047 UBE4BO95155 1302 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 A6NJR5 290 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 H0YCG3 227 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 H3BRB1 525 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 MSCO60682 206 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 BMP6P22004 513 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 PRCPP42785 496 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 ZNF131P52739 623 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 SMTNP53814 917 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 DMP1Q13316 513 aaPredicted RBP17.04■□□□□ 0.32
VAMP1-207ENST00000539047 PLCB4Q15147 1175 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 PPP2R5AQ15172 486 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 FSCN1Q16658 493 aaKnown RBP17.04■□□□□ 0.32
VAMP1-207ENST00000539047 ZNF484Q5JVG2 852 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 MAEAQ7L5Y9 396 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 LUZP1Q86V48 1076 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 GUF1Q8N442 669 aaKnown RBP17.04■□□□□ 0.32
VAMP1-207ENST00000539047 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 TCP11Q8WWU5 503 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 MCOLN1Q9GZU1 580 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 TUT1Q9H6E5 874 aaKnown RBP17.04■□□□□ 0.32
VAMP1-207ENST00000539047 RWDD2AQ9UIY3 292 aa17.04■□□□□ 0.32
VAMP1-207ENST00000539047 RSPH10B2B2RC85 870 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 STBD1O95210 358 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 GCNT3O95395 438 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 MYL3P08590 195 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 C6orf222P0C671 652 aaPredicted RBP17.03■□□□□ 0.32
VAMP1-207ENST00000539047 RSPH10BP0C881 870 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
VAMP1-207ENST00000539047 PLS3P13797 630 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 ATP4AP20648 1035 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 GRK4P32298 578 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 DNM2P50570 870 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 EHHADHQ08426 723 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 ENOX1Q8TC92 643 aaKnown RBP17.03■□□□□ 0.32
VAMP1-207ENST00000539047 SH2D3AQ9BRG2 576 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 TBC1D7Q9P0N9 293 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 MAPK8IP1Q9UQF2 711 aa17.03■□□□□ 0.32
VAMP1-207ENST00000539047 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 K7ENM7 598 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
VAMP1-207ENST00000539047 ADCY6O43306 1168 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 FGFR1OPO95684 399 aaKnown RBP17.02■□□□□ 0.32
VAMP1-207ENST00000539047 INHAP05111 366 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 SCP2P22307 547 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 RTP1P59025 263 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 STK4Q13043 487 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 TRPV1Q8NER1 839 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 LENG1Q96BZ8 264 aaPredicted RBP17.02■□□□□ 0.32
VAMP1-207ENST00000539047 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
VAMP1-207ENST00000539047 UPF3AQ9H1J1 476 aaKnown RBP17.02■□□□□ 0.32
VAMP1-207ENST00000539047 DHX33Q9H6R0 707 aaKnown RBP17.02■□□□□ 0.32
VAMP1-207ENST00000539047 PCDHB13Q9Y5F0 798 aa17.02■□□□□ 0.32
VAMP1-207ENST00000539047 MAGEB2O15479 319 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 F2P00734 622 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 CD44P16070 742 aaKnown RBP17.01■□□□□ 0.31
VAMP1-207ENST00000539047 CCNE1P24864 410 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 GJA9P57773 515 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms