RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 NYAP2Q9P242 653 aa6.34□□□□□ -1.39
SNHG1-207ENST00000537965 THEGQ9P2T0 379 aa6.34□□□□□ -1.39
SNHG1-207ENST00000537965 ARPP21Q9UBL0 812 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-207ENST00000537965 ZHX1Q9UKY1 873 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-207ENST00000537965 SYNPO2Q9UMS6 1093 aa6.34□□□□□ -1.39
SNHG1-207ENST00000537965 TNNQ9UQP3 1299 aa6.34□□□□□ -1.39
SNHG1-207ENST00000537965 RAXQ9Y2V3 346 aa6.34□□□□□ -1.39
SNHG1-207ENST00000537965 TRANK1O15050 2925 aa6.34□□□□□ -1.39
SNHG1-207ENST00000537965 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 F5H6K3 240 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 TREHO43280 583 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 SNAI1O95863 264 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 DLGAP3O95886 979 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 FGBP02675 491 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 ASGR1P07306 291 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 CYP2D6P10635 497 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 TAL1P17542 331 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 ATP5JP18859 108 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 MAPK1P28482 360 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 EPHB4P54760 987 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 GJA9P57773 515 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 NKX3-2P78367 333 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 PLCB3Q01970 1234 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 GSTM4Q03013 218 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 KLRC3Q07444 240 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 LRRFIP1Q32MZ4 808 aaKnown RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 CCDC144BQ3MJ40 725 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 SBK1Q52WX2 424 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 TMEM240Q5SV17 173 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 CCSAPQ6IQ19 270 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 ZNF444Q8N0Y2 327 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 TET1Q8NFU7 2136 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 EPS8L3Q8TE67 593 aaKnown RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 HERVK_113Q902F9 699 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 UTP4Q969X6 686 aaKnown RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 MYRFLQ96LU7 910 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 ASB2Q96Q27 587 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 HAUS7Q99871 368 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 UPF3AQ9H1J1 476 aaKnown RBP6.33□□□□□ -1.4
SNHG1-207ENST00000537965 BOLA2Q9H3K6 86 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 IL23AQ9NPF7 189 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 FBXO28Q9NVF7 368 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 CHD7Q9P2D1 2997 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 FEM1BQ9UK73 627 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 TBX21Q9UL17 535 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 SLC4A4Q9Y6R1 1079 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 SCN5AQ14524 2016 aa6.33□□□□□ -1.4
SNHG1-207ENST00000537965 ZBED9Q6R2W3 1325 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 CDH23Q9H251 3354 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 ASB14A6NK59 587 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 PATL2C9JE40 543 aaKnown RBP6.32□□□□□ -1.4
SNHG1-207ENST00000537965 SART1O43290 800 aaKnown RBP6.32□□□□□ -1.4
SNHG1-207ENST00000537965 PRKAB2O43741 272 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 GADD45BO75293 160 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-207ENST00000537965 B3GALT4O96024 378 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 GNAT2P19087 354 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 FSTP19883 344 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 TNFAIP2Q03169 654 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 EXOSC6Q5RKV6 272 aaKnown RBP6.32□□□□□ -1.4
SNHG1-207ENST00000537965 RASIP1Q5U651 963 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 IQSEC1Q6DN90 963 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 FDX2Q6P4F2 183 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 CTR9Q6PD62 1173 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 ZNF365Q70YC5 407 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 NOL8Q76FK4 1167 aaKnown RBP6.32□□□□□ -1.4
SNHG1-207ENST00000537965 CLEC10AQ8IUN9 316 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 FAM126BQ8IXS8 530 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 CPXCR1Q8N123 301 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
SNHG1-207ENST00000537965 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 REPS2Q8NFH8 660 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 CHURC1Q8WUH1 139 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 PPM1EQ8WY54 764 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 USP26Q9BXU7 913 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 AP5M1Q9H0R1 490 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 PRDM12Q9H4Q4 367 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 SUGCTQ9HAC7 445 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 SLC38A10Q9HBR0 1119 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 STOML1Q9UBI4 398 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 Q9Y3F1 56 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 CHD9Q3L8U1 2897 aa6.32□□□□□ -1.4
SNHG1-207ENST00000537965 SCN10AQ9Y5Y9 1956 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 KIAA1217Q5T5P2 1943 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 TMEM238LA0A1B0GVL6 79 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 TTLL1O95922 423 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 CD4P01730 458 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 CYP11A1P05108 521 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 ZFYP08048 801 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-207ENST00000537965 SLC3A2P08195 630 aaKnown RBP6.31□□□□□ -1.4
SNHG1-207ENST00000537965 PFKMP08237 780 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 SUPT20HL2P0C7V6 817 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 RLBP1P12271 317 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 CSF2RAP15509 400 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 PREPP48147 710 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 PDE4BQ07343 736 aa6.31□□□□□ -1.4
SNHG1-207ENST00000537965 ITGA7Q13683 1181 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms