RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LMNB2Q03252 620 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 KLC1Q07866 573 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 TMEM154Q6P9G4 183 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 MAEAQ7L5Y9 396 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 DDX42Q86XP3 938 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 FBF1Q8TES7 1133 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 TRAPPC9Q96Q05 1148 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 CTNNAL1Q9UBT7 734 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 PRDM1O75626 825 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 OAS1P00973 400 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 SCNN1DP51172 638 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 PLS1Q14651 629 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 ASTE1Q2TB18 679 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 KIF2BQ8N4N8 673 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 KIFAP3Q92845 792 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 NOC4LQ9BVI4 516 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 VCXQ9H320 206 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 BAG3O95817 575 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 SF3A3Q12874 501 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 RTN1Q16799 776 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 SCFD2Q8WU76 684 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 ADAM7Q9H2U9 754 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 USP15Q9Y4E8 981 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 ADAMTSL1Q8N6G6 1762 aa12.32□□□□□ -0.44
SEMA4D-221ENST00000537934 CREB3O43889 395 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 FTCDO95954 541 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 LDHCP07864 332 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 PDHA1P08559 390 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ACADSP16219 412 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 CALB2P22676 271 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 PDE6CP51160 858 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 RNASE9P60153 205 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ATP2C1P98194 919 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 EARS2Q5JPH6 523 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 STAG2Q8N3U4 1231 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 IFT43Q96FT9 208 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 DUSP9Q99956 384 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ATP8A2Q9NTI2 1148 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 INTS9Q9NV88 658 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 BLOC1S6Q9UL45 172 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 DAGLAQ9Y4D2 1042 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 SLC1A4P43007 532 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 MTIF2P46199 727 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 DNA2P51530 1060 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 POLE2P56282 527 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 PPP4CP60510 307 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ZNF174Q15697 407 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 MAIP1Q8WWC4 291 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 PGM2Q96G03 612 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 DHTKD1Q96HY7 919 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 CNOT6LQ96LI5 555 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 SELENOSQ9BQE4 189 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 RNPEPL1Q9HAU8 725 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 LRRC4CQ9HCJ2 640 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ZNF277Q9NRM2 450 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ANAPC4Q9UJX5 808 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 SSU72P8A0A1W2PR75 194 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 KRT2P35908 639 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 RHBDL3P58872 404 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 DHX9Q08211 1270 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 NAB2Q15742 525 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 OR52E8Q6IFG1 317 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 RAB3IPQ96QF0 476 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 ZWILCHQ9H900 591 aa12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-221ENST00000537934 GAKO14976 1311 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 CDK5RAP2Q96SN8 1893 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 YDJCA8MPS7 323 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 PSMC4P43686 418 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 PEX5P50542 639 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 EHHADHQ08426 723 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 PTGDRQ13258 359 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 RNF220Q5VTB9 566 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 GIMAP8Q8ND71 665 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 FGD4Q96M96 766 aa12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 UBE2OQ9C0C9 1292 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-221ENST00000537934 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms