RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TXLNGYQ9BZA5 131 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 CNOT8Q9UFF9 292 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 AMFRQ9UKV5 643 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 FAM187AA6NFU0 413 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 PLSCR1O15162 318 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 DAPK3O43293 454 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 C21orf2O43822 256 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 XRCC5P13010 732 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 POU5F1Q01860 360 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 BYSLQ13895 437 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 NEDD9Q14511 834 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 KNOP1Q1ED39 458 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 KRT71Q3SY84 523 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 WLSQ5T9L3 541 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 GKAP1Q5VSY0 366 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 CROCCP2Q86T23 111 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 FMNL3Q8IVF7 1028 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 SGSM3Q96HU1 749 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 NAP1L3Q99457 506 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 TMX4Q9H1E5 349 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 KDM4CQ9H3R0 1056 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 KCNMB3Q9NPA1 279 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 TYW1Q9NV66 732 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 DAAM1Q9Y4D1 1078 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-218ENST00000537641 CYP3A7-CYP3A51PA0A087WV96 503 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 F8W031 263 aaPredicted RBP13.21□□□□□ -0.3
CPSF7-218ENST00000537641 TTI1O43156 1089 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 NUDT17P0C025 328 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 DRD4P21917 467 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 CYP3A7P24462 503 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 RPL13P26373 211 aaKnown RBP13.21□□□□□ -0.3
CPSF7-218ENST00000537641 XRCC4Q13426 336 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 QPCTQ16769 361 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 GPATCH4Q5T3I0 446 aaKnown RBP13.21□□□□□ -0.3
CPSF7-218ENST00000537641 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.3
CPSF7-218ENST00000537641 ADGRF4Q8IZF3 695 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 ERMNQ8TAM6 284 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 MASTLQ96GX5 879 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 FMO2Q99518 471 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 FAM129AQ9BZQ8 928 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 KANSL2Q9H9L4 492 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.3
CPSF7-218ENST00000537641 USP40Q9NVE5 1235 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 AMACRQ9UHK6 382 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 SERPINB13Q9UIV8 391 aa13.21□□□□□ -0.3
CPSF7-218ENST00000537641 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■■□ 20.9
CPSF7-218ENST00000537641 PPP1R11O60927 126 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 TTLL1O95922 423 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 TMEM253P0C7T8 217 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 AKR1B1P15121 316 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 LMNB1P20700 586 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 TMOD1P28289 359 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 STAT1P42224 750 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 PTENP60484 403 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 ERMARDQ5T6L9 678 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 CYB5D1Q6P9G0 228 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 RFFLQ8WZ73 363 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 TEKT1Q969V4 418 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 XPO6Q96QU8 1125 aaKnown RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 JPH2Q9BR39 696 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 CARD9Q9H257 536 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPSF7-218ENST00000537641 MCM8Q9UJA3 840 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
CPSF7-218ENST00000537641 LOC102724159A0A0B4J2E5 919 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GOLGA6L10A0A0M3HER8 536 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 G3V3G9 751 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 ZBTB5O15062 677 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 MED24O75448 989 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GSTA1P08263 222 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 ITGA4P13612 1032 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GBP1P32455 592 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 FLT3P36888 993 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 SCTRP47872 440 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GIT2Q14161 759 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 PWP2Q15269 919 aaKnown RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 NFIL3Q16649 462 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms