RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 GRIK1P39086 918 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 MASP1P48740 699 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 CDK8P49336 464 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 CALD1Q05682 793 aaKnown RBP9.48□□□□□ -0.89
LMO3-216ENST00000537568 CCL14Q16627 93 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 FAM110CQ1W6H9 321 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 ALDH1L2Q3SY69 923 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 CDPF1Q6NVV7 123 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 PRRT2Q7Z6L0 340 aaPredicted RBP9.48□□□□□ -0.89
LMO3-216ENST00000537568 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 C2CD4AQ8NCU7 369 aaPredicted RBP9.48□□□□□ -0.89
LMO3-216ENST00000537568 TMX1Q9H3N1 280 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 CD209Q9NNX6 404 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 PLXNA3P51805 1871 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 ASH1LQ9NR48 2969 aaKnown RBP9.48□□□□□ -0.89
LMO3-216ENST00000537568 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
LMO3-216ENST00000537568 GOLGA6L3A6NEY3 463 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 WDR64B1ANS9 1081 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 RFXAPO00287 272 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 DCXO43602 365 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
LMO3-216ENST00000537568 ASMTLO95671 621 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 CYP11A1P05108 521 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 SPINK2P20155 84 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 CACNB3P54284 484 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
LMO3-216ENST00000537568 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
LMO3-216ENST00000537568 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 GLIPR1L2Q4G1C9 344 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 CCDC129Q6ZRS4 1044 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 SMC5Q8IY18 1101 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 C19orf47Q8N9M1 422 aaKnown RBP9.47□□□□□ -0.89
LMO3-216ENST00000537568 UBE2Q2Q8WVN8 375 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 ZMYM5Q9UJ78 669 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 ZNF112Q9UJU3 913 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 JAG2Q9Y219 1238 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 SLC45A1Q9Y2W3 748 aa9.47□□□□□ -0.89
LMO3-216ENST00000537568 EP300Q09472 2414 aaPredicted RBP9.46□□□□□ -0.89
LMO3-216ENST00000537568 CEP250Q9BV73 2442 aa9.46□□□□□ -0.89
LMO3-216ENST00000537568 CXCL11O14625 94 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 KIAA0355O15063 1070 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 ECEL1O95672 775 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 ADH5P11766 374 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 USP11P51784 963 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 RBM5P52756 815 aaKnown RBP eCLIP9.46□□□□□ -0.9
LMO3-216ENST00000537568 TLE2Q04725 743 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 FPGSQ05932 587 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 ACAP1Q15027 740 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 POU4F3Q15319 338 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 TCEA2Q15560 299 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 TMEM240Q5SV17 173 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 MIGA2Q7L4E1 593 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 ANKRD18AQ8IVF6 992 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 FBXL6Q8N531 539 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 SMCR8Q8TEV9 937 aaPredicted RBP9.46□□□□□ -0.9
LMO3-216ENST00000537568 FBLIM1Q8WUP2 373 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 ARHGAP45Q92619 1136 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 USP6NLQ92738 828 aa9.46□□□□□ -0.9
LMO3-216ENST00000537568 G3BP2Q9UN86 482 aaKnown RBP9.46□□□□□ -0.9
LMO3-216ENST00000537568 FAM95CA0A1B0GW59 222 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 EPOPA6NHQ4 379 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 SNAP23O00161 211 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 ADAMTS4O75173 837 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 ATE1O95260 518 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
LMO3-216ENST00000537568 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 NOL9Q5SY16 702 aaKnown RBP9.45□□□□□ -0.9
LMO3-216ENST00000537568 GJC2Q5T442 439 aaPredicted RBP9.45□□□□□ -0.9
LMO3-216ENST00000537568 MRM1Q6IN84 353 aaKnown RBP9.45□□□□□ -0.9
LMO3-216ENST00000537568 HSCBQ8IWL3 235 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 FTSJ3Q8IY81 847 aaKnown RBP9.45□□□□□ -0.9
LMO3-216ENST00000537568 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 STAG1Q8WVM7 1258 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 LPAR1Q92633 364 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 IRF2BPLQ9H1B7 796 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 PCDHA4Q9UN74 947 aa9.45□□□□□ -0.9
LMO3-216ENST00000537568 PEX10O60683 326 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 S100BP04271 92 aaPredicted RBP9.44□□□□□ -0.9
LMO3-216ENST00000537568 F13BP05160 661 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 GSTP1P09211 210 aaKnown RBP9.44□□□□□ -0.9
LMO3-216ENST00000537568 FKBP1AP62942 108 aaKnown RBP9.44□□□□□ -0.9
LMO3-216ENST00000537568 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
LMO3-216ENST00000537568 CLEC17AQ6ZS10 378 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 PDZD3Q86UT5 571 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 DTX1Q86Y01 620 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 SHISA5Q8N114 240 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 ST13P5Q8NFI4 369 aaPredicted RBP9.44□□□□□ -0.9
LMO3-216ENST00000537568 TM9SF2Q99805 663 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 KRTAP9-2Q9BYQ4 174 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 ACTL7BQ9Y614 415 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 FRYLO94915 3013 aa9.44□□□□□ -0.9
LMO3-216ENST00000537568 GAKO14976 1311 aa9.43□□□□□ -0.9
LMO3-216ENST00000537568 PROB1E7EW31 1015 aa9.43□□□□□ -0.9
LMO3-216ENST00000537568 HTR3BO95264 441 aa9.43□□□□□ -0.9
LMO3-216ENST00000537568 MYOGP15173 224 aa9.43□□□□□ -0.9
LMO3-216ENST00000537568 IL9P15248 144 aa9.43□□□□□ -0.9
LMO3-216ENST00000537568 ZKSCAN1P17029 563 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms