RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 NRG4Q8WWG1 115 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RUFY2Q8WXA3 655 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DNAJC9Q8WXX5 260 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CCDC127Q96BQ5 260 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CHMP6Q96FZ7 201 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 NUDCD1Q96RS6 583 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 LRRC27Q9C0I9 530 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 BLZF1Q9H2G9 400 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 GPCPD1Q9NPB8 672 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 NMRK1Q9NWW6 199 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 KCNH3Q9ULD8 1083 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DENND2AQ9ULE3 1009 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PAIP2BQ9ULR5 123 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 TRIM49BA6NDI0 452 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 A6NL46 340 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RAD51CO43502 376 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 FTCDO95954 541 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 TPBGLP0DKB5 382 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CREB1P16220 341 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 TARSP26639 723 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 SERPINB3P29508 390 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PBX1P40424 430 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 UBXN1Q04323 297 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DYNC1I2Q13409 638 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 RIPK1Q13546 671 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 KRT31Q15323 416 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 FAM182AQ5T1J6 154 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ZNF280DQ6N043 979 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 NAA16Q6N069 864 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 ZNF449Q6P9G9 518 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 OTUD6AQ7L8S5 288 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DZIP1Q86YF9 867 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 KBTBD2Q8IY47 623 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 STAG2Q8N3U4 1231 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SMYD1Q8NB12 490 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 NKX2-3Q8TAU0 364 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RIN3Q8TB24 985 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 MIPOL1Q8TD10 442 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PHKBQ93100 1093 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 HIC2Q96JB3 615 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 TUBGCP5Q96RT8 1024 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ETNK1Q9HBU6 452 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DMAP1Q9NPF5 467 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 AASDHPPTQ9NRN7 309 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 FGFR1OP2Q9NVK5 253 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.04□□□□□ -1.76
MCF2-210ENST00000536274 RASAL2Q9UJF2 1139 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 FBXL5Q9UKA1 691 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 LTBP1Q14766 1721 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ANKRD36CQ5JPF3 1778 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 C5orf60A6NFR6 353 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 HMGB1P1B2RPK0 211 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 P4HA2O15460 535 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 TAF5LO75529 589 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 FLOT1O75955 427 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 KRT38O76015 456 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ITGA2BP08514 1039 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 GHRP10912 638 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 VCAM1P19320 739 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 RASA1P20936 1047 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 EPHB2P29323 1055 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PDIA3P30101 505 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 PAFAH1B1P43034 410 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 VPS41P49754 854 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 LACTBP83111 547 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 MDM2Q00987 491 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 GSTM4Q03013 218 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CKAP4Q07065 602 aaKnown RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 POSTNQ15063 836 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 KIAA0753Q2KHM9 967 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.04□□□□□ -1.76
MCF2-210ENST00000536274 CCDC70Q6NSX1 233 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 EMBQ6PCB8 327 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 APBB1IPQ7Z5R6 666 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 TREML1Q86YW5 311 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 TMTC1Q8IUR5 882 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 MAP7D3Q8IWC1 876 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 IFNL2Q8IZJ0 200 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ANKLE1Q8NAG6 615 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.04□□□□□ -1.76
MCF2-210ENST00000536274 CEP70Q8NHQ1 597 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 GDAP1Q8TB36 358 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CCHCR1Q8TD31 782 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DDX12PQ92771 950 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 GLMNQ92990 594 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 EVI5LQ96CN4 794 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 MKNK1Q9BUB5 465 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 PDGFDQ9GZP0 370 aaPredicted RBP4.04□□□□□ -1.76
MCF2-210ENST00000536274 TAOK3Q9H2K8 898 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DPH5Q9H2P9 285 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 ARMC7Q9H6L4 198 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 IL21Q9HBE4 155 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 DDX21Q9NR30 783 aaKnown RBP eCLIP4.04□□□□□ -1.76
MCF2-210ENST00000536274 MKS1Q9NXB0 559 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SCOCQ9UIL1 159 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 HAO1Q9UJM8 370 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 SNX12Q9UMY4 172 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 LRRC42Q9Y546 428 aa4.04□□□□□ -1.76
MCF2-210ENST00000536274 CCDC88AQ3V6T2 1871 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms