RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PNMA5Q96PV4 448 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SETDB2Q96T68 719 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 RTFDC1Q9BY42 306 aaPredicted RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SH2D4AQ9H788 454 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 MKNK2Q9HBH9 465 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 BLOC1S4Q9NUP1 217 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TMEM51Q9NW97 253 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 VPS18Q9P253 973 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 HDAC6Q9UBN7 1215 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SNX12Q9UMY4 172 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 HCN4Q9Y3Q4 1203 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 JRKLQ9Y4A0 524 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 C10orf71Q711Q0 1435 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 PLIN4Q96Q06 1357 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 IGKV6D-41A0A0C4DH26 115 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 MYMKA6NI61 221 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 RBAK-RBAKDNI3L0D1 243 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 AGPSO00116 658 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 ENC1O14682 589 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 OIP5O43482 229 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 NDUFB5O43674 189 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SRGAP2O75044 1071 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 TACC1O75410 805 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SNHG28P0DPA3 235 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 FCER1AP12319 257 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 TCP1P17987 556 aaKnown RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 TNFRSF8P28908 595 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 EIF1AXP47813 144 aaKnown RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 RNF144AP50876 292 aaPredicted RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LRRC63Q05C16 580 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 KIF5AQ12840 1032 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 GRAPQ13588 217 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 PDIA5Q14554 519 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SEPT2Q15019 361 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SPA17Q15506 151 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 GRIK5Q16478 980 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LETM2Q2VYF4 491 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 HSP90B2PQ58FF3 399 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 HYIQ5T013 277 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 PDXDC1Q6P996 788 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LRRC31Q6UY01 552 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LEKR1Q6ZMV7 388 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 BICDL1Q6ZP65 573 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LRRC55Q6ZSA7 311 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SV2BQ7L1I2 683 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 NBPF5PQ86XG9 351 aaPredicted RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 ZC3H3Q8IXZ2 948 aaKnown RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 RASSF8Q8NHQ8 419 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 GRAPLQ8TC17 118 aaPredicted RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 TBCKQ8TEA7 893 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 AENQ8WTP8 325 aaKnown RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 TGFBRAP1Q8WUH2 860 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SYN2Q92777 582 aaPredicted RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 CALML4Q96GE6 196 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 EYA3Q99504 573 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 PLIN2Q99541 437 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 GRIP2Q9C0E4 1043 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LRRC27Q9C0I9 530 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 NDST4Q9H3R1 872 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 RIC8AQ9NPQ8 531 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 ARHGAP20Q9P2F6 1191 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 SRP68Q9UHB9 627 aaKnown RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 FEZ2Q9UHY8 353 aaPredicted RBP6.33□□□□□ -1.4
VPS33A-203ENST00000536212 LRFN2Q9ULH4 789 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 TFR2Q9UP52 801 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 PCDHA13Q9Y5I0 950 aa6.33□□□□□ -1.4
VPS33A-203ENST00000536212 GAKO14976 1311 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 CASZ1Q86V15 1759 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 GPR25O00155 361 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 EPHB6O15197 1021 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 NKRFO15226 690 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 ZNF185O15231 689 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 CCNT1O60563 726 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 SHOX2O60902 331 aaPredicted RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 IL1R1P14778 569 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 EIF4A3P38919 411 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 TECP42680 631 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 KIF11P52732 1056 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 RHBDL3P58872 404 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 C11orf91Q3C1V1 193 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 ZCWPW2Q504Y3 356 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 ASPRV1Q53RT3 343 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 C1orf53Q5VUE5 145 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 C9orf131Q5VYM1 1079 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 DPH6Q7L8W6 267 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 ZNF804AQ7Z570 1209 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 SRLQ86TD4 932 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 CCDC84Q86UT8 332 aaPredicted RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 RGL4Q8IZJ4 473 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 REXO1Q8N1G1 1221 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 RNF10Q8N5U6 811 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 AFAP1L1Q8TED9 768 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 LARP4BQ92615 738 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 RAD54LQ92698 747 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 CAVIN3Q969G5 261 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 CCDC42Q96M95 316 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms