RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NOC2LQ9Y3T9 749 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 MROH1Q8NDA8 1641 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 EIF2AK4Q9P2K8 1649 aaKnown RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TET3O43151 1660 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-202ENST00000535689 SETD5Q9C0A6 1442 aa4.38□□□□□ -1.71
SNHG1-202ENST00000535689 TIAM1Q13009 1591 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 NWD1Q149M9 1564 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 ST20-MTHFSA0A0A6YYL1 179 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 PRAMEF25A6NGN4 478 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 TRAF5O00463 557 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 NKRFO15226 690 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 FOXP2O15409 715 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 BUB1BO60566 1050 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 PPP1R11O60927 126 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 KRT37O76014 449 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 CFBP00751 764 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 BPIP17213 487 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 CDK11BP21127 795 aaKnown RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 MECP2P51608 486 aaKnown RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 EXOSC10Q01780 885 aaKnown RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 DSG1Q02413 1049 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 ROM1Q03395 351 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 CACNB2Q08289 660 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 PCBP1Q15365 356 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 EPHA7Q15375 998 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 TIGD5Q53EQ6 642 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 FAM180AQ6UWF9 173 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 TTLL7Q6ZT98 887 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 BRINP3Q76B58 766 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 CXXC5Q7LFL8 322 aaKnown RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 FERMT3Q86UX7 667 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 PHYKPLQ8IUZ5 450 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 KIAA1958Q8N8K9 716 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 HIPK4Q8NE63 616 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 CLIC6Q96NY7 704 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 ACAP3Q96P50 834 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 MTFR1LQ9H019 292 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 DLL4Q9NR61 685 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 TOMM22Q9NS69 142 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 THG1LQ9NWX6 298 aaKnown RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 SLC5A4Q9NY91 659 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 PPARGC1AQ9UBK2 798 aaKnown RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 FBXO10Q9UK96 956 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 B3GALT1Q9Y5Z6 326 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF644Q9H582 1327 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 BLMP54132 1417 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-202ENST00000535689 NCOA2Q15596 1464 aa4.37□□□□□ -1.71
SNHG1-202ENST00000535689 EFCAB6Q5THR3 1501 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 LRP5O75197 1615 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 E2F8A0AVK6 867 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 BTBD11A6QL63 1104 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 MAN2B1O00754 1011 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 N4BP3O15049 544 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 GPR39O43194 453 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 FBXO21O94952 628 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 PAPLNO95428 1278 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 U2AF1L5P0DN76 240 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-202ENST00000535689 MTHFD2P13995 350 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 VCAM1P19320 739 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 VIPR1P32241 457 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 BCAR1P56945 870 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 U2AF1Q01081 240 aaKnown RBP eCLIP4.36□□□□□ -1.714e-8■■□□□ 13.4
SNHG1-202ENST00000535689 CAP1Q01518 475 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 TMEM132BQ14DG7 1078 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 DDB1Q16531 1140 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 MLANAQ16655 118 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF385BQ569K4 471 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 TTC38Q5R3I4 469 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 FYB2Q5VWT5 728 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 CD300LDQ6UXZ3 194 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 ESPNLQ6ZVH7 1005 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 RASSF3Q86WH2 238 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 DDX42Q86XP3 938 aaKnown RBP eCLIP4.36□□□□□ -1.717e-6■■■□□ 16.5
SNHG1-202ENST00000535689 C7orf31Q8N865 590 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF610Q8N9Z0 462 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 SSH1Q8WYL5 1049 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 DLG3Q92796 817 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 GPR101Q96P66 508 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-202ENST00000535689 DIRC2Q96SL1 478 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 OXSMQ9NWU1 459 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 FBXL7Q9UJT9 491 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 MRFAP1Q9Y605 127 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 DCCP43146 1447 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 CAMSAP2Q08AD1 1489 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 RPRD2Q5VT52 1461 aaKnown RBP4.36□□□□□ -1.71
SNHG1-202ENST00000535689 MAP3K1Q13233 1512 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 ARHGEF5Q12774 1597 aa4.36□□□□□ -1.71
SNHG1-202ENST00000535689 PIK3C2BO00750 1634 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 LRP6O75581 1613 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 CEP152O94986 1710 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 UBA6A0AVT1 1052 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-202ENST00000535689 TCAF2A6NFQ2 919 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 AMY2AP04746 511 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 AMY2BP19961 511 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 GLDCP23378 1020 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 TXKP42681 527 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 GUCY2FP51841 1108 aa4.35□□□□□ -1.71
SNHG1-202ENST00000535689 STAT4Q14765 748 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms