RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 HOOK3Q86VS8 718 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 FBXO11Q86XK2 927 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 TRIM42Q8IWZ5 723 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CLMNQ96JQ2 1002 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 LBHD1Q9BQE6 289 aaPredicted RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 RAVER2Q9HCJ3 691 aaKnown RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 GGT7Q9UJ14 662 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CTNND2Q9UQB3 1225 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 GOLGA8KD6RF30 607 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 MSH4O15457 936 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 KRT14P02533 472 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ARP10275 920 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 INHBEP58166 350 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CUL3Q13618 768 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 PRR16Q569H4 304 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 HNRNPLLQ8WVV9 542 aaKnown RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CCDC43Q96MW1 224 aaKnown RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CCT8L2Q96SF2 557 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 SH2D3AQ9BRG2 576 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ATP6V0A4Q9HBG4 840 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 TMEM150BA6NC51 233 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CREB3O43889 395 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 PPFIA2O75334 1257 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ATP6V1G1O75348 118 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 RPN1P04843 607 aaKnown RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 PTPRAP18433 802 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 SESN3P58005 492 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 TNIP1Q15025 636 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 POTEGQ6S5H5 508 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CEP128Q6ZU80 1094 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CPXCR1Q8N123 301 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 TATDN2Q93075 761 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 WRNIP1Q96S55 665 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 TMOD2Q9NZR1 351 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 VAV3Q9UKW4 847 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 STX10O60499 249 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 USP2O75604 605 aaPredicted RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 PAX3P23760 479 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 STAT6P42226 847 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 CCDC122Q5T0U0 273 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 TREML2Q5T2D2 321 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 GALNT17Q6IS24 598 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 NLRP14Q86W24 1093 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 LONP2Q86WA8 852 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 LDHDQ86WU2 507 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 VSTM4Q8IW00 320 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 LMNTD2Q8IXW0 634 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 TEKT4Q8WW24 435 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 BICD1Q96G01 975 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 MBOAT7Q96N66 472 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 TRIM9Q9C026 710 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 CCSER1Q9C0I3 900 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 RGL1Q9NZL6 768 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 CDH23Q9H251 3354 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 NT5C2P49902 561 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 HMGCS2P54868 508 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 LRRC41Q15345 812 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 PPP4R3AQ6IN85 833 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 SPATA21Q7Z572 469 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 AMNQ9BXJ7 453 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 SLC39A2Q9NP94 309 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 NOP53Q9NZM5 478 aaKnown RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF232Q9UNY5 417 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 ITGB5P18084 799 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 LSP1P33241 339 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 KLK7P49862 253 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 CASP5P51878 434 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 IQCEQ6IPM2 695 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 BZW1Q7L1Q6 419 aaKnown RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 TMEM139Q8IV31 216 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 ELOA2Q8IYF1 753 aaPredicted RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 FUKQ8N0W3 1084 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 SNRNP27Q8WVK2 155 aaKnown RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 HVCN1Q96D96 273 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 ATG4CQ96DT6 458 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 DUSP9Q99956 384 aaKnown RBP9.83□□□□□ -0.84
SF3B2-216ENST00000534765 SELENOSQ9BQE4 189 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 LOC285556D6RIA3 1793 aa9.83□□□□□ -0.84
SF3B2-216ENST00000534765 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 FSBPO95073 299 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 FXR2P51116 673 aaKnown RBP eCLIP9.82□□□□□ -0.844e-10■■■■□ 19.4
SF3B2-216ENST00000534765 SLC8A3P57103 927 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 MRPS9P82933 396 aaKnown RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 SPATS2Q86XZ4 545 aaKnown RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 BATF3Q9NR55 127 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RNF181Q9P0P0 153 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF112Q9UJU3 913 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 ABCB11O95342 1321 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 ABL1P00519 1130 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 IDEP14735 1019 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 NR1D1P20393 614 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 IGBP1P78318 339 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 CYP4A11Q02928 519 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 CKAP4Q07065 602 aaKnown RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RRAGBQ5VZM2 374 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms