RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 PLCB3Q01970 1234 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 PTH1RQ03431 593 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 SMC1AQ14683 1233 aaKnown RBP10.55□□□□□ -0.72
PACS1-214ENST00000533811 FAM160B1Q5W0V3 765 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 MCTP2Q6DN12 878 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 CASC1Q6TDU7 716 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 PLPPR4Q7Z2D5 763 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 ERMP1Q7Z2K6 904 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 SMC5Q8IY18 1101 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 CKAP2LQ8IYA6 745 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 KIAA0319LQ8IZA0 1049 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 LRRC43Q8N309 656 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
PACS1-214ENST00000533811 METTL13Q8N6R0 699 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 C12orf76Q8N812 135 aaPredicted RBP10.55□□□□□ -0.72
PACS1-214ENST00000533811 CYP2W1Q8TAV3 490 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 NECTIN4Q96NY8 510 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 MXRA8Q9BRK3 442 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 TMEM117Q9H0C3 514 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 RWDD1Q9H446 243 aaPredicted RBP10.55□□□□□ -0.72
PACS1-214ENST00000533811 SPG21Q9NZD8 308 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 DBR1Q9UK59 544 aaKnown RBP10.55□□□□□ -0.72
PACS1-214ENST00000533811 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 MYO15AQ9UKN7 3530 aa10.55□□□□□ -0.72
PACS1-214ENST00000533811 CCDC69A6NI79 296 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 HOXA2O43364 376 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 HBP1O60381 514 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 VTNP04004 478 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 ARP10275 920 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 ZNF76P36508 570 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 NUCB1Q02818 461 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 ITIH3Q06033 890 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 KANK3Q6NY19 840 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 LRRC55Q6ZSA7 311 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 IGDCC4Q8TDY8 1250 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 CASD1Q96PB1 797 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 ADAM7Q9H2U9 754 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 LY9Q9HBG7 655 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 NFASCO94856 1347 aa10.54□□□□□ -0.72
PACS1-214ENST00000533811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 NT5C1B-RDH14C9J2C7 533 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 CLASP2O75122 1294 aaKnown RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 ZSCAN20P17040 1043 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 METAP2P50579 478 aaKnown RBP eCLIP10.53□□□□□ -0.72
PACS1-214ENST00000533811 CRYBB1P53674 252 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 ITGB3BPQ13352 177 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 BMS1Q14692 1282 aaKnown RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 MB21D2Q8IYB1 491 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 KCNG4Q8TDN1 519 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 RUFY2Q8WXA3 655 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 AUTS2Q8WXX7 1259 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 ZNF668Q96K58 619 aaPredicted RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 MAP3K14Q99558 947 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 ELAC1Q9H777 363 aaKnown RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 AGO4Q9HCK5 861 aaKnown RBP10.53□□□□□ -0.72
PACS1-214ENST00000533811 ZNF302Q9NR11 478 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 RNF19AQ9NV58 838 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 FBXL21Q9UKT6 434 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 AKT3Q9Y243 479 aa10.53□□□□□ -0.72
PACS1-214ENST00000533811 COL1A2P08123 1366 aa10.52□□□□□ -0.72
PACS1-214ENST00000533811 GVINP1Q7Z2Y8 2422 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 C2orf71A6NGG8 1288 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 STK25O00506 426 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 PRC1O43663 620 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 CXCL14O95715 111 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 CCNE2O96020 404 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 IGHDP01880 384 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 EPCAMP16422 314 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 RFX1P22670 979 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 SLC26A2P50443 739 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 CLCN3P51790 818 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 CLCN5P51795 746 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 NAPAP54920 295 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 FAM189BP81408 668 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 DSC3Q14574 896 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 CEP55Q53EZ4 464 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 ZNF484Q5JVG2 852 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 CWF19L1Q69YN2 538 aaKnown RBP10.52□□□□□ -0.73
PACS1-214ENST00000533811 MIS18BP1Q6P0N0 1132 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 MRPL43Q8N983 215 aaKnown RBP10.52□□□□□ -0.73
PACS1-214ENST00000533811 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 TMEM169Q96HH4 297 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 SCLT1Q96NL6 688 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 ANO3Q9BYT9 981 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 DENND4AQ7Z401 1863 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 WDR81Q562E7 1941 aa10.52□□□□□ -0.73
PACS1-214ENST00000533811 PI15O43692 258 aa10.51□□□□□ -0.73
PACS1-214ENST00000533811 ATG7O95352 703 aa10.51□□□□□ -0.73
PACS1-214ENST00000533811 C22orf31O95567 290 aa10.51□□□□□ -0.73
PACS1-214ENST00000533811 EOMESO95936 686 aa10.51□□□□□ -0.73
PACS1-214ENST00000533811 NLRP11P59045 1033 aaKnown RBP10.51□□□□□ -0.73
PACS1-214ENST00000533811 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms