RNA–Protein interactions for RNA: ENST00000533546.5

RELA-222, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-222ENST00000533546 PTPRSQ13332 1948 aa18.21■□□□□ 0.51
RELA-222ENST00000533546 LCHNA4D1U4 455 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 MAFO75444 373 aaPredicted RBP18.2■□□□□ 0.5
RELA-222ENST00000533546 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
RELA-222ENST00000533546 OR52Z1P0C646 297 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 SPATA31C1P0DKV0 1188 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 KCNJ6P48051 423 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 RAB30Q15771 203 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 FAM117BQ6P1L5 589 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 SPRED2Q7Z698 418 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 SNX21Q969T3 373 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 CDX2Q99626 313 aaPredicted RBP18.2■□□□□ 0.5
RELA-222ENST00000533546 ZSWIM4Q9H7M6 989 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 CYP26B1Q9NR63 512 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 GINS2Q9Y248 185 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
RELA-222ENST00000533546 H3BQV1 296 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
RELA-222ENST00000533546 EFCAB14O75071 495 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 GJB5O95377 273 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 CA3P07451 260 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 YWHABP31946 246 aaKnown RBP18.19■□□□□ 0.5
RELA-222ENST00000533546 NLRP11P59045 1033 aaKnown RBP18.19■□□□□ 0.5
RELA-222ENST00000533546 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 PTGDRQ13258 359 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
RELA-222ENST00000533546 APBB2Q92870 758 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 OSMRQ99650 979 aa18.19■□□□□ 0.5
RELA-222ENST00000533546 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
RELA-222ENST00000533546 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
RELA-222ENST00000533546 SPTBN5Q9NRC6 3674 aaKnown RBP18.18■□□□□ 0.5
RELA-222ENST00000533546 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 TMEM265A0A087WTH1 108 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 MED24O75448 989 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 CRYBB1P53674 252 aaPredicted RBP18.18■□□□□ 0.5
RELA-222ENST00000533546 CATSPER3Q86XQ3 398 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 MYOCDQ8IZQ8 938 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 ERVK-5Q9HDB9 667 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 AKT3Q9Y243 479 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 GBF1Q92538 1859 aa18.18■□□□□ 0.5
RELA-222ENST00000533546 M0QZ92 97 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 TLL1O43897 1013 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 MGEA5O60502 916 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 DKC1O60832 514 aaKnown RBP eCLIP18.17■□□□□ 0.5
RELA-222ENST00000533546 LYPLA2O95372 231 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 TMOD1P28289 359 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 GPC3P51654 580 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 ECM1Q16610 540 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 FAM228AQ86W67 206 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 KSR1Q8IVT5 923 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 CRIPAKQ8N1N5 446 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 USP38Q8NB14 1042 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 PIGOQ8TEQ8 1089 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 MYLIPQ8WY64 445 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 INTS4Q96HW7 963 aaKnown RBP18.17■□□□□ 0.5
RELA-222ENST00000533546 RAD9AQ99638 391 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
RELA-222ENST00000533546 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 ST3GAL5Q9UNP4 418 aa18.17■□□□□ 0.5
RELA-222ENST00000533546 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
RELA-222ENST00000533546 RPS6KA5O75582 802 aa18.16■□□□□ 0.5
RELA-222ENST00000533546 UPP2O95045 317 aa18.16■□□□□ 0.5
RELA-222ENST00000533546 AMHP03971 560 aa18.16■□□□□ 0.5
RELA-222ENST00000533546 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.5
RELA-222ENST00000533546 HTRA4P83105 476 aaPredicted RBP18.16■□□□□ 0.5
RELA-222ENST00000533546 TAP1Q03518 808 aa18.16■□□□□ 0.5
RELA-222ENST00000533546 XKR9Q5GH70 373 aa18.16■□□□□ 0.5
RELA-222ENST00000533546 ZBED2Q9BTP6 218 aa18.16■□□□□ 0.5
RELA-222ENST00000533546 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
RELA-222ENST00000533546 SUCLA2Q9P2R7 463 aaPredicted RBP18.16■□□□□ 0.5
RELA-222ENST00000533546 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 REV3LO60673 3130 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 TRANK1O15050 2925 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 RFXAPO00287 272 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 SYT1P21579 422 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 FGFR4P22455 802 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 NFX1Q12986 1120 aaKnown RBP18.15■□□□□ 0.5
RELA-222ENST00000533546 PAK2Q13177 524 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 RILPL1Q5EBL4 403 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 PPP2R2DQ66LE6 453 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 OTUD6AQ7L8S5 288 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 TMEM143Q96AN5 459 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 POLR3CQ9BUI4 534 aaPredicted RBP18.15■□□□□ 0.5
RELA-222ENST00000533546 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 XPNPEP1Q9NQW7 623 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 ANKEF1Q9NU02 776 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
RELA-222ENST00000533546 A0A087WZ62 844 aa18.14■□□□□ 0.49
RELA-222ENST00000533546 EPOPA6NHQ4 379 aa18.14■□□□□ 0.49
RELA-222ENST00000533546 EIF4BP23588 611 aaKnown RBP18.14■□□□□ 0.49
RELA-222ENST00000533546 CDC25AP30304 524 aa18.14■□□□□ 0.49
RELA-222ENST00000533546 RARRES1P49788 294 aa18.14■□□□□ 0.49
RELA-222ENST00000533546 ADGRE1Q14246 886 aa18.14■□□□□ 0.49
RELA-222ENST00000533546 PDIA5Q14554 519 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms