RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ST3GAL5Q9UNP4 418 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 REV3LO60673 3130 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 TNFRSF10AO00220 468 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 TBX3O15119 743 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 GPR32O75388 356 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 LINC00271P0C7V0 271 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 CTNNB1P35222 781 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 SARSP49591 514 aaKnown RBP26.4■■□□□ 1.82
SMPD1-209ENST00000533196 NEK4P51957 841 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 TFF2Q03403 129 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 UGCGQ16739 394 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 TMEM266Q2M3C6 531 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 XKR3Q5GH77 459 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 TMEM40Q8WWA1 233 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 GJA10Q969M2 543 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 NIFKQ9BYG3 293 aaKnown RBP26.4■■□□□ 1.82
SMPD1-209ENST00000533196 CDHR5Q9HBB8 845 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 BRMS1Q9HCU9 246 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 RGS18Q9NS28 235 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 LRFN2Q9ULH4 789 aa26.4■■□□□ 1.82
SMPD1-209ENST00000533196 SPTBN5Q9NRC6 3674 aaKnown RBP26.39■■□□□ 1.82
SMPD1-209ENST00000533196 VTNP04004 478 aa26.39■■□□□ 1.82
SMPD1-209ENST00000533196 TARBP2Q15633 366 aaKnown RBP26.39■■□□□ 1.82
SMPD1-209ENST00000533196 KIZQ2M2Z5 673 aa26.39■■□□□ 1.82
SMPD1-209ENST00000533196 OSMRQ99650 979 aa26.39■■□□□ 1.82
SMPD1-209ENST00000533196 KCNMB3Q9NPA1 279 aa26.39■■□□□ 1.82
SMPD1-209ENST00000533196 AKT3Q9Y243 479 aa26.39■■□□□ 1.82
SMPD1-209ENST00000533196 MYO7AQ13402 2215 aa26.39■■□□□ 1.81
SMPD1-209ENST00000533196 FDPSP14324 419 aaKnown RBP26.38■■□□□ 1.81
SMPD1-209ENST00000533196 CLCN3P51790 818 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 CDC42EP1Q00587 391 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 TBC1D8BQ0IIM8 1120 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 PPP2R5CQ13362 524 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 NAALADL2Q58DX5 795 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 PIK3AP1Q6ZUJ8 805 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 SLC24A5Q71RS6 500 aa26.38■■□□□ 1.81
SMPD1-209ENST00000533196 UHRF1Q96T88 793 aaPredicted RBP26.38■■□□□ 1.81
SMPD1-209ENST00000533196 DENND3A2RUS2 1198 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 SLC37A4O43826 429 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 DKC1O60832 514 aaKnown RBP eCLIP26.37■■□□□ 1.81
SMPD1-209ENST00000533196 NLRP11P59045 1033 aaKnown RBP26.37■■□□□ 1.81
SMPD1-209ENST00000533196 PSMC5P62195 406 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 FAM228AQ86W67 206 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 NECAB1Q8N987 351 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 P2RX5Q93086 422 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 ADAM2Q99965 735 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 PCDHB7Q9Y5E2 793 aa26.37■■□□□ 1.81
SMPD1-209ENST00000533196 FNDC1Q4ZHG4 1894 aaPredicted RBP26.36■■□□□ 1.81
SMPD1-209ENST00000533196 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.36■■□□□ 1.81
SMPD1-209ENST00000533196 KRT2P35908 639 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 KCNQ1P51787 676 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 LRRC71Q8N4P6 559 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 BANK1Q8NDB2 785 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 NSUN7Q8NE18 718 aaKnown RBP26.36■■□□□ 1.81
SMPD1-209ENST00000533196 OXER1Q8TDS5 423 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 ADAMTS10Q9H324 1103 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 NSUN3Q9H649 340 aaKnown RBP26.36■■□□□ 1.81
SMPD1-209ENST00000533196 UBE2ZQ9H832 354 aaPredicted RBP26.36■■□□□ 1.81
SMPD1-209ENST00000533196 GJB4Q9NTQ9 266 aa26.36■■□□□ 1.81
SMPD1-209ENST00000533196 SEPT9Q9UHD8 586 aaPredicted RBP26.36■■□□□ 1.81
SMPD1-209ENST00000533196 KIAA1671Q9BY89 1806 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 C9IYK1 514 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 MGEA5O60502 916 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 CCNT1O60563 726 aaKnown RBP26.35■■□□□ 1.81
SMPD1-209ENST00000533196 STBD1O95210 358 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 LARGE1O95461 756 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 EIF4BP23588 611 aaKnown RBP26.35■■□□□ 1.81
SMPD1-209ENST00000533196 PPP1R16BQ96T49 567 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 ELAC1Q9H777 363 aaKnown RBP26.35■■□□□ 1.81
SMPD1-209ENST00000533196 VAV3Q9UKW4 847 aa26.35■■□□□ 1.81
SMPD1-209ENST00000533196 IGKV6-21A0A0C4DH24 114 aa26.34■■□□□ 1.81
SMPD1-209ENST00000533196 SEC24BO95487 1268 aa26.34■■□□□ 1.81
SMPD1-209ENST00000533196 GPC3P51654 580 aa26.34■■□□□ 1.81
SMPD1-209ENST00000533196 FAM189BP81408 668 aa26.34■■□□□ 1.81
SMPD1-209ENST00000533196 CEP89Q96ST8 783 aa26.34■■□□□ 1.81
SMPD1-209ENST00000533196 JPH2Q9BR39 696 aaPredicted RBP26.34■■□□□ 1.81
SMPD1-209ENST00000533196 PPME1Q9Y570 386 aa26.34■■□□□ 1.81
SMPD1-209ENST00000533196 MRPL42Q9Y6G3 142 aaKnown RBP26.34■■□□□ 1.81
SMPD1-209ENST00000533196 NCK2O43639 380 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 MARCH6O60337 910 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 QARSP47897 775 aaKnown RBP26.33■■□□□ 1.81
SMPD1-209ENST00000533196 DNM2P50570 870 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 DSC3Q14574 896 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 MTERF2Q49AM1 385 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 SLFN12Q8IYM2 578 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 TNFRSF25Q93038 417 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 TMEM161AQ9NX61 479 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 ATG2AQ2TAZ0 1938 aa26.33■■□□□ 1.81
SMPD1-209ENST00000533196 MAFO75444 373 aaPredicted RBP26.32■■□□□ 1.8
SMPD1-209ENST00000533196 BAG4O95429 457 aaKnown RBP26.32■■□□□ 1.8
SMPD1-209ENST00000533196 MMP1P03956 469 aa26.32■■□□□ 1.8
SMPD1-209ENST00000533196 P4HBP07237 508 aaKnown RBP26.32■■□□□ 1.8
SMPD1-209ENST00000533196 ZSCAN20P17040 1043 aaPredicted RBP26.32■■□□□ 1.8
SMPD1-209ENST00000533196 TRIM29Q14134 588 aa26.32■■□□□ 1.8
SMPD1-209ENST00000533196 LEXMQ3ZCV2 418 aa26.32■■□□□ 1.8
SMPD1-209ENST00000533196 EXOC8Q8IYI6 725 aa26.32■■□□□ 1.8
SMPD1-209ENST00000533196 HAS1Q92839 578 aa26.32■■□□□ 1.8
SMPD1-209ENST00000533196 DDX11L8A8MPP1 907 aa26.31■■□□□ 1.8
SMPD1-209ENST00000533196 EML1O00423 815 aa26.31■■□□□ 1.8
SMPD1-209ENST00000533196 GRM6O15303 877 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms