RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 KRT17Q04695 432 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 ITGB3BPQ13352 177 aaPredicted RBP16.47■□□□□ 0.23
CDC27-209ENST00000532893 KIZQ2M2Z5 673 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 ASTLQ6HA08 431 aaPredicted RBP16.47■□□□□ 0.23
CDC27-209ENST00000532893 CES5AQ6NT32 575 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 FAM228AQ86W67 206 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 CASP10Q92851 521 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 CASD1Q96PB1 797 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 TMEM117Q9H0C3 514 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
CDC27-209ENST00000532893 ELAC1Q9H777 363 aaKnown RBP16.47■□□□□ 0.23
CDC27-209ENST00000532893 ASGR2P07307 311 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 WEE2P0C1S8 567 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 SLC26A2P50443 739 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 CRYBB1P53674 252 aaPredicted RBP16.46■□□□□ 0.23
CDC27-209ENST00000532893 ITIH3Q06033 890 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 FRMD5Q7Z6J6 570 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 RUFY2Q8WXA3 655 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 ZNF558Q96NG5 402 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 OSMRQ99650 979 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 AGO4Q9HCK5 861 aaKnown RBP16.46■□□□□ 0.23
CDC27-209ENST00000532893 SPG21Q9NZD8 308 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 LIMD1Q9UGP4 676 aa16.46■□□□□ 0.23
CDC27-209ENST00000532893 IGKV6D-21A0A0A0MT36 114 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 DDX39AO00148 427 aaKnown RBP16.45■□□□□ 0.22
CDC27-209ENST00000532893 CCNE2O96020 404 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 VTNP04004 478 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 DSC3Q14574 896 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 CEP55Q53EZ4 464 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 ZNF484Q5JVG2 852 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 FAM160B1Q5W0V3 765 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 ABHD15Q6UXT9 468 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 MRPL43Q8N983 215 aaKnown RBP16.45■□□□□ 0.22
CDC27-209ENST00000532893 NKD2Q969F2 451 aaPredicted RBP16.45■□□□□ 0.22
CDC27-209ENST00000532893 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 NECTIN4Q96NY8 510 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 MFSD1Q9H3U5 465 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 RNF19AQ9NV58 838 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 HCFC2Q9Y5Z7 792 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 WDR87Q6ZQQ6 2873 aa16.45■□□□□ 0.22
CDC27-209ENST00000532893 DCHS1Q96JQ0 3298 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 C2orf71A6NGG8 1288 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 ZBTB42B2RXF5 422 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 PRC1O43663 620 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 CLASP2O75122 1294 aaKnown RBP16.44■□□□□ 0.22
CDC27-209ENST00000532893 GPR32O75388 356 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
CDC27-209ENST00000532893 CHMLP26374 656 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 CA8P35219 290 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 PPM1AP35813 382 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 MTHFRP42898 656 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 AAMPQ13685 434 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 SMC1AQ14683 1233 aaKnown RBP16.44■□□□□ 0.22
CDC27-209ENST00000532893 RARS2Q5T160 578 aaKnown RBP16.44■□□□□ 0.22
CDC27-209ENST00000532893 SWSAP1Q6NVH7 229 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 PDXDC2PQ6P474 469 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 TRMT1LQ7Z2T5 733 aaKnown RBP16.44■□□□□ 0.22
CDC27-209ENST00000532893 TMTC2Q8N394 836 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 METTL13Q8N6R0 699 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
CDC27-209ENST00000532893 GVINP1Q7Z2Y8 2422 aa16.44■□□□□ 0.22
CDC27-209ENST00000532893 EVPLQ92817 2033 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 DMDP11532 3685 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 MEIS1O00470 390 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 HOXA2O43364 376 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 CXCL14O95715 111 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 ATP4AP20648 1035 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 ID4P47928 161 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 ERMP1Q7Z2K6 904 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 CCDC60Q8IWA6 550 aaPredicted RBP16.43■□□□□ 0.22
CDC27-209ENST00000532893 ABI1Q8IZP0 508 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 ADSSL1Q8N142 457 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 RNF169Q8NCN4 708 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 ZNF302Q9NR11 478 aa16.43■□□□□ 0.22
CDC27-209ENST00000532893 COL1A2P08123 1366 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 SH2B2O14492 632 aaPredicted RBP16.42■□□□□ 0.22
CDC27-209ENST00000532893 C22orf31O95567 290 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 CALM1P0DP23 149 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 CALM2P0DP24 149 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 CALM3P0DP25 149 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 CLCN5P51795 746 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 ECHDC2Q86YB7 292 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 CKAP2LQ8IYA6 745 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 LRRC43Q8N309 656 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 TDRD5Q8NAT2 981 aaKnown RBP16.42■□□□□ 0.22
CDC27-209ENST00000532893 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
CDC27-209ENST00000532893 EP300Q09472 2414 aaPredicted RBP16.41■□□□□ 0.22
CDC27-209ENST00000532893 NT5C1B-RDH14C9J2C7 533 aa16.41■□□□□ 0.22
CDC27-209ENST00000532893 FOSP01100 380 aaPredicted RBP16.41■□□□□ 0.22
CDC27-209ENST00000532893 ZSCAN20P17040 1043 aaPredicted RBP16.41■□□□□ 0.22
CDC27-209ENST00000532893 ZNF76P36508 570 aa16.41■□□□□ 0.22
CDC27-209ENST00000532893 COL9A3Q14050 684 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms