RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TMEM174Q8WUU8 243 aa18.8■□□□□ 0.6
BRCA2-204ENST00000530893 FRMD4BQ9Y2L6 1034 aa18.8■□□□□ 0.6
BRCA2-204ENST00000530893 ARP10275 920 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 RXRBP28702 533 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 STAT1P42224 750 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 GYS2P54840 703 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 ALCAMQ13740 583 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 TNIP1Q15025 636 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 MCF2L2Q86YR7 1114 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 SAMD3Q8N6K7 520 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 LMBR1Q8WVP7 490 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 LXNQ9BS40 222 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 PACSIN1Q9BY11 444 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 TMEM39BQ9GZU3 492 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 RBM12Q9NTZ6 932 aaKnown RBP18.79■□□□□ 0.6
BRCA2-204ENST00000530893 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
BRCA2-204ENST00000530893 RPTORQ8N122 1335 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 ARHGEF35A5YM69 484 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 MAPTP10636 758 aaKnown RBP18.79■□□□□ 0.6
BRCA2-204ENST00000530893 MATR3P43243 847 aaKnown RBP eCLIP18.79■□□□□ 0.6
BRCA2-204ENST00000530893 LMAN1P49257 510 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 NNTQ13423 1086 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 ENOX2Q16206 610 aaKnown RBP18.79■□□□□ 0.6
BRCA2-204ENST00000530893 MUM1L1Q5H9M0 696 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 ODR4Q5SWX8 454 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 IFT20Q8IY31 132 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 GOLGA6L1Q8N7Z2 621 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 HDAC7Q8WUI4 952 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 TAF4BQ92750 862 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 CAVIN3Q969G5 261 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 STRA6Q9BX79 667 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 AGPAT3Q9NRZ7 376 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 ZNRF3Q9ULT6 936 aa18.79■□□□□ 0.6
BRCA2-204ENST00000530893 MYH11P35749 1972 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 RNF40O75150 1001 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 FTCDO95954 541 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 CCDC172P0C7W6 258 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 RFX1P22670 979 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 POLD1P28340 1107 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 FMO5P49326 533 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 UBXN2AP68543 259 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 ZC2HC1CQ53FD0 456 aaPredicted RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 ZBED3Q96IU2 234 aaPredicted RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 PBKQ96KB5 322 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 INPP4AQ96PE3 977 aaPredicted RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 STK33Q9BYT3 514 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 BCAS3Q9H6U6 928 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 WRAP73Q9P2S5 460 aaPredicted RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 PGAP2Q9UHJ9 254 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 CCPG1Q9ULG6 757 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 PPP1R37O75864 691 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 NPEPPSP55786 919 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 ZYXQ15942 572 aaKnown RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 PRPF38AQ8NAV1 312 aaKnown RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 LPAR1Q92633 364 aa18.78■□□□□ 0.6
BRCA2-204ENST00000530893 ZBTB12Q9Y330 459 aaPredicted RBP18.78■□□□□ 0.6
BRCA2-204ENST00000530893 GOLGA6BA6NDN3 693 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 ZBTB39O15060 712 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 WDR46O15213 610 aaKnown RBP18.77■□□□□ 0.6
BRCA2-204ENST00000530893 P4HBP07237 508 aaKnown RBP18.77■□□□□ 0.6
BRCA2-204ENST00000530893 H2AFZP0C0S5 128 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 H2AFVQ71UI9 128 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 MIGA2Q7L4E1 593 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 MS4A14Q96JA4 679 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.6
BRCA2-204ENST00000530893 GINM1Q9NU53 330 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 FBXO28Q9NVF7 368 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 PNMA2Q9UL42 364 aa18.77■□□□□ 0.6
BRCA2-204ENST00000530893 ZNF536O15090 1300 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 COL4A5P29400 1685 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 ITGB5P18084 799 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 ACTN2P35609 894 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 SOX5P35711 763 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 SLC30A10Q6XR72 485 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 GSPT2Q8IYD1 628 aaKnown RBP18.76■□□□□ 0.59
BRCA2-204ENST00000530893 SYCE1Q8N0S2 351 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 LRRC57Q8N9N7 239 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 TMEM206Q9H813 350 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 FAM204AQ9H8W3 233 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 POLD4Q9HCU8 107 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 GDF3Q9NR23 364 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 EHD2Q9NZN4 543 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 LARSQ9P2J5 1176 aaKnown RBP18.76■□□□□ 0.59
BRCA2-204ENST00000530893 DBR1Q9UK59 544 aaKnown RBP18.76■□□□□ 0.59
BRCA2-204ENST00000530893 F8VZ95 297 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 KIF4AO95239 1232 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 LMNB1P20700 586 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 GGCXP38435 758 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 TNNC1P63316 161 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 ALS2CLQ60I27 953 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 PCNX4Q63HM2 1172 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 SND1Q7KZF4 910 aaKnown RBP eCLIP18.76■□□□□ 0.59
BRCA2-204ENST00000530893 MIER3Q7Z3K6 550 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 AFAP1L1Q8TED9 768 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.76■□□□□ 0.59
BRCA2-204ENST00000530893 VTI1AQ96AJ9 217 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms