RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 BFSP2Q13515 415 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 EFCAB12Q6NXP0 572 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 KCTD17Q8N5Z5 321 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 CALML4Q96GE6 196 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 BHMT2Q9H2M3 363 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 XPNPEP1Q9NQW7 623 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 BLOC1S4Q9NUP1 217 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 SIP14410 1827 aa23.77■■□□□ 1.4
CAPN1-220ENST00000530567 RBAK-RBAKDNI3L0D1 243 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 CAND2O75155 1236 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 RAG1P15918 1043 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 RFC5P40937 340 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 EMC2Q15006 297 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 ZNF618Q5T7W0 954 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 RESP18Q5W5W9 173 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 CCDC155Q8N6L0 562 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 METTL13Q8N6R0 699 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 CDK5RAP3Q96JB5 506 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 BMP2KQ9NSY1 1161 aaPredicted RBP23.76■■□□□ 1.39
CAPN1-220ENST00000530567 PRKAG2Q9UGJ0 569 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 DNM3Q9UQ16 869 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 TXLNAP40222 546 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 POLGP54098 1239 aaPredicted RBP23.76■■□□□ 1.39
CAPN1-220ENST00000530567 MGAT3Q09327 533 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 NAALADL2Q58DX5 795 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 SLC7A3Q8WY07 619 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 SUGCTQ9HAC7 445 aa23.76■■□□□ 1.39
CAPN1-220ENST00000530567 ARHGEF35A5YM69 484 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 H0YGN5 161 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 USO1O60763 962 aaKnown RBP23.75■■□□□ 1.39
CAPN1-220ENST00000530567 DGAT1O75907 488 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 CTSHP09668 335 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 IQCF3P0C7M6 154 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 SELPP16109 830 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 CCL23P55773 120 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 ADALQ6DHV7 355 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 PADI6Q6TGC4 694 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 LRRC8DQ7L1W4 858 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 RETREG2Q8NC44 543 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 CCDC43Q96MW1 224 aaKnown RBP23.75■■□□□ 1.39
CAPN1-220ENST00000530567 SCN5AQ14524 2016 aa23.75■■□□□ 1.39
CAPN1-220ENST00000530567 CHRNA1P02708 482 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 SLC12A3P55017 1021 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 MBTPS1Q14703 1052 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 GPNMBQ14956 572 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 FAM26DQ5JW98 314 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 MFSD5Q6N075 450 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 RASSF8Q8NHQ8 419 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 BADQ92934 168 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 VWCEQ96DN2 955 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 JPH2Q9BR39 696 aaPredicted RBP23.74■■□□□ 1.39
CAPN1-220ENST00000530567 ATP6V0A4Q9HBG4 840 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 CCDC39Q9UFE4 941 aa23.74■■□□□ 1.39
CAPN1-220ENST00000530567 VTNP04004 478 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 RPLP2P05387 115 aaKnown RBP23.73■■□□□ 1.39
CAPN1-220ENST00000530567 PLA2G4BP0C869 781 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 MRPS6P82932 125 aaKnown RBP23.73■■□□□ 1.39
CAPN1-220ENST00000530567 TMEM62Q0P6H9 643 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 RSPH3Q86UC2 560 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 EXOC8Q8IYI6 725 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 NME8Q8N427 588 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 SYT2Q8N9I0 419 aaPredicted RBP23.73■■□□□ 1.39
CAPN1-220ENST00000530567 RAD54LQ92698 747 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 TMEM143Q96AN5 459 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 SCLYQ96I15 445 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 MTRQ99707 1265 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 RUSC1Q9BVN2 902 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 OSBPL7Q9BZF2 842 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 CDY2AQ9Y6F7 541 aa23.73■■□□□ 1.39
CAPN1-220ENST00000530567 GAS2O43903 313 aaKnown RBP23.72■■□□□ 1.39
CAPN1-220ENST00000530567 CYP11B2P19099 503 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 CMA1P23946 247 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 TMOD1P28289 359 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 E2F4Q16254 413 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 RRAGBQ5VZM2 374 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 PANK2Q9BZ23 570 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 STK17AQ9UEE5 414 aa23.72■■□□□ 1.39
CAPN1-220ENST00000530567 A0A1W2PQ27 194 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 A0A1W2PQ64 194 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 A0A1W2PQD8 194 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 RSPH10B2B2RC85 870 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 GPR32O75388 356 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 RSPH10BP0C881 870 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 CSF2RAP15509 400 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 RINT1Q6NUQ1 792 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 CCDC73Q6ZRK6 1079 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 C1orf186Q6ZWK4 172 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 PDILTQ8N807 584 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 MAP7D2Q96T17 732 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 GPRC5CQ9NQ84 441 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 SUCLA2Q9P2R7 463 aaPredicted RBP23.71■■□□□ 1.39
CAPN1-220ENST00000530567 AKT3Q9Y243 479 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 HPSEQ9Y251 543 aa23.71■■□□□ 1.39
CAPN1-220ENST00000530567 FAM237AA0A1B0GTK4 181 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 NBNO60934 754 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 MAGEA10P43363 369 aaPredicted RBP23.7■■□□□ 1.38
CAPN1-220ENST00000530567 MCM6Q14566 821 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 CLEC17AQ6ZS10 378 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 MCPH1Q8NEM0 835 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 TET1Q8NFU7 2136 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms