RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 SUGCTQ9HAC7 445 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 CYP26B1Q9NR63 512 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 MAFO75444 373 aaPredicted RBP18.88■□□□□ 0.61
SF3B2-209ENST00000530322 GJB5O95377 273 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 AMHP03971 560 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 YWHABP31946 246 aaKnown RBP18.88■□□□□ 0.61
SF3B2-209ENST00000530322 NPEPPSP55786 919 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 KIZQ2M2Z5 673 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 TPH2Q8IWU9 490 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 ZNF579Q8NAF0 562 aaKnown RBP18.88■□□□□ 0.61
SF3B2-209ENST00000530322 TMEM40Q8WWA1 233 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 SNX21Q969T3 373 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 INTS4Q96HW7 963 aaKnown RBP18.88■□□□□ 0.61
SF3B2-209ENST00000530322 MAP7D2Q96T17 732 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 PPP1R16BQ96T49 567 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 SLC28A3Q9HAS3 691 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 PADI3Q9ULW8 664 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 AKT3Q9Y243 479 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 GINS2Q9Y248 185 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 COL6A3P12111 3177 aa18.88■□□□□ 0.61
SF3B2-209ENST00000530322 ZBTB39O15060 712 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 TLL1O43897 1013 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 LYPLA2O95372 231 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 TECP42680 631 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 CRYBB1P53674 252 aaPredicted RBP18.87■□□□□ 0.61
SF3B2-209ENST00000530322 PTGDRQ13258 359 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 MYO9BQ13459 2157 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 DRP2Q13474 957 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 RILPL1Q5EBL4 403 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 MYOCDQ8IZQ8 938 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 ZNF710Q8N1W2 664 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 ADAMTS10Q9H324 1103 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.87■□□□□ 0.61
SF3B2-209ENST00000530322 PPME1Q9Y570 386 aa18.87■□□□□ 0.61
SF3B2-209ENST00000530322 TTC3P53804 2025 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 CA3P07451 260 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 NLRP11P59045 1033 aaKnown RBP18.86■□□□□ 0.61
SF3B2-209ENST00000530322 PAK2Q13177 524 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 TMEM266Q2M3C6 531 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 OTUD6AQ7L8S5 288 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 TOP1MTQ969P6 601 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 CEP170P1Q96L14 293 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 CDX2Q99626 313 aaPredicted RBP18.86■□□□□ 0.61
SF3B2-209ENST00000530322 RAD9AQ99638 391 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 OSMRQ99650 979 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 ZBED2Q9BTP6 218 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 ERVK-5Q9HDB9 667 aa18.86■□□□□ 0.61
SF3B2-209ENST00000530322 NOC2LQ9Y3T9 749 aaKnown RBP18.86■□□□□ 0.61
SF3B2-209ENST00000530322 ENPP3O14638 875 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 ARHGEF15O94989 841 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 SPATA31C1P0DKV0 1188 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 PDCP20941 246 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.613e-8■■■□□ 15.1
SF3B2-209ENST00000530322 GPC3P51654 580 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 PPP2R2DQ66LE6 453 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 RTN4RL1Q86UN2 441 aaPredicted RBP18.85■□□□□ 0.61
SF3B2-209ENST00000530322 LINC01599Q8WXQ3 324 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
SF3B2-209ENST00000530322 FTHL17Q9BXU8 183 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 TMX1Q9H3N1 280 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 DHX33Q9H6R0 707 aaKnown RBP18.85■□□□□ 0.61
SF3B2-209ENST00000530322 TUFT1Q9NNX1 390 aa18.85■□□□□ 0.61
SF3B2-209ENST00000530322 LCHNA4D1U4 455 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 LAD1O00515 517 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 RPS6KA5O75582 802 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 RFC5P40937 340 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 DNM2P50570 870 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 HTRA4P83105 476 aaPredicted RBP18.84■□□□□ 0.61
SF3B2-209ENST00000530322 XKR9Q5GH70 373 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 FAM117BQ6P1L5 589 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 FAM228AQ86W67 206 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 CATSPER3Q86XQ3 398 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 EXOC8Q8IYI6 725 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 SLC7A3Q8WY07 619 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 ZNF668Q96K58 619 aaPredicted RBP18.84■□□□□ 0.61
SF3B2-209ENST00000530322 POLR3CQ9BUI4 534 aaPredicted RBP18.84■□□□□ 0.61
SF3B2-209ENST00000530322 ANKEF1Q9NU02 776 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 STXBP5LQ9Y2K9 1186 aa18.84■□□□□ 0.61
SF3B2-209ENST00000530322 GPR182O15218 404 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 MED24O75448 989 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 PRPHP41219 470 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 POLGP54098 1239 aaPredicted RBP18.83■□□□□ 0.6
SF3B2-209ENST00000530322 TAP1Q03518 808 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 NFX1Q12986 1120 aaKnown RBP18.83■□□□□ 0.6
SF3B2-209ENST00000530322 PDIA5Q14554 519 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 ODR4Q5SWX8 454 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 FAM43BQ6ZT52 329 aaPredicted RBP18.83■□□□□ 0.6
SF3B2-209ENST00000530322 MYLIPQ8WY64 445 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
SF3B2-209ENST00000530322 SUCLA2Q9P2R7 463 aaPredicted RBP18.83■□□□□ 0.6
SF3B2-209ENST00000530322 ST3GAL5Q9UNP4 418 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 INSL6Q9Y581 213 aa18.83■□□□□ 0.6
SF3B2-209ENST00000530322 VPS37CA5D8V6 355 aaPredicted RBP18.82■□□□□ 0.6
SF3B2-209ENST00000530322 MGEA5O60502 916 aa18.82■□□□□ 0.6
SF3B2-209ENST00000530322 UPP2O95045 317 aa18.82■□□□□ 0.6
SF3B2-209ENST00000530322 XRCC6P12956 609 aaKnown RBP eCLIP18.82■□□□□ 0.6
SF3B2-209ENST00000530322 SYT1P21579 422 aa18.82■□□□□ 0.6
SF3B2-209ENST00000530322 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
SF3B2-209ENST00000530322 RPA1P27694 616 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms