RNA–Protein interactions for RNA: ENST00000529923.1

UBQLN1-205, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-205ENST00000529923 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 ABCC12Q96J65 1359 aa3.48□□□□□ -1.85
UBQLN1-205ENST00000529923 UBN2Q6ZU65 1347 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 KIF13BQ9NQT8 1826 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 PCNTO95613 3336 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 C7orf72A4D263 438 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 NPHS1O60500 1241 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 RECKO95980 971 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 FUCA1P04066 466 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 VAMP1P23763 118 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 EPHX2P34913 555 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 IARSP41252 1262 aaKnown RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 EPS15P42566 896 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 NASPP49321 788 aaPredicted RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 SARSP49591 514 aaKnown RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 CTCFP49711 727 aaPredicted RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 EIF4A1P60842 406 aaKnown RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 NFKB2Q00653 900 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 CACNB2Q08289 660 aaPredicted RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 TAF7Q15545 349 aaPredicted RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 SPATS1Q496A3 300 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 SLC10A5Q5PT55 438 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 SUSD4Q5VX71 490 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 VHLLQ6RSH7 139 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 TTLL7Q6ZT98 887 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 GGNQ86UU5 652 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 ZNF34Q8IZ26 560 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 CNTROBQ8N137 903 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 GPC2Q8N158 579 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 CARFQ8N187 725 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 RASGRP4Q8TDF6 673 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 CPA5Q8WXQ8 436 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 DDX1Q92499 740 aaKnown RBP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 NOX5Q96PH1 765 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 APBA2Q99767 749 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 GPRC5CQ9NQ84 441 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.47□□□□□ -1.853e-9■■■■■ 29.8
UBQLN1-205ENST00000529923 PGAP2Q9UHJ9 254 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 HACL1Q9UJ83 578 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 NIP7Q9Y221 180 aaKnown RBP eCLIP3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 SIT1Q9Y3P8 196 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 TJP1Q07157 1748 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 TAF1LQ8IZX4 1826 aa3.47□□□□□ -1.85
UBQLN1-205ENST00000529923 RNF123Q5XPI4 1314 aa3.46□□□□□ -1.85
UBQLN1-205ENST00000529923 WDR33Q9C0J8 1336 aaKnown RBP3.46□□□□□ -1.85
UBQLN1-205ENST00000529923 ANKRD34BA5PLL1 514 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 TRAF5O00463 557 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 NOBOXO60393 691 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 KCNH1O95259 989 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 NTSR2O95665 410 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 NTRK1P04629 796 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 U2AF1L5P0DN76 240 aaPredicted RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 PLS3P13797 630 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 ALDH1B1P30837 517 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 RGS19P49795 217 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 LBX1P52954 281 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 CASP7P55210 303 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 KRTAP10-2P60368 255 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 U2AF1Q01081 240 aaKnown RBP eCLIP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 DLX2Q07687 328 aaPredicted RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 DEFB115Q30KQ5 88 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 WWC2Q6AWC2 1192 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 PNMA8AQ86V59 439 aaPredicted RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 NT5DC4Q86YG4 428 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 ZBTB8AQ96BR9 441 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 DDX11Q96FC9 970 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 SHDQ96IW2 340 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 CRAMP1Q96RY5 1269 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 THUMPD2Q9BTF0 503 aaKnown RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 RTFDC1Q9BY42 306 aaPredicted RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 DDX21Q9NR30 783 aaKnown RBP eCLIP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 SPATA6Q9NWH7 488 aaPredicted RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 NTMQ9P121 344 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 CLEC1BQ9P126 229 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 APEX2Q9UBZ4 518 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 ZNF652Q9Y2D9 606 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 COL5A3P25940 1745 aaPredicted RBP3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 NRXN2Q9P2S2 1712 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 CHD4Q14839 1912 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 COL4A5P29400 1685 aa3.46□□□□□ -1.86
UBQLN1-205ENST00000529923 MAP3K15Q6ZN16 1313 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 RIC1Q4ADV7 1423 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 K7ESM1 405 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 NOP56O00567 594 aaKnown RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 SMARCA5O60264 1052 aaPredicted RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 CNR2P34972 360 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 GJA8P48165 433 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 GJA9P57773 515 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 RBM10P98175 930 aaKnown RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 HDLBPQ00341 1268 aaKnown RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 CXCL9Q07325 125 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 SCRN1Q12765 414 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 EFEMP1Q12805 493 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 SMAD4Q13485 552 aaKnown RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 CNGB1Q14028 1251 aaPredicted RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 PROSER3Q2NL68 480 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 ZXDCQ2QGD7 858 aaPredicted RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 POMZP3Q6PJE2 187 aa3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 USP50Q70EL3 339 aaPredicted RBP3.45□□□□□ -1.86
UBQLN1-205ENST00000529923 ZNF513Q8N8E2 541 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms