RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 TMEM40Q8WWA1 233 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 KAT6AQ92794 2004 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 SPG21Q9NZD8 308 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 PLXNA3P51805 1871 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 C2orf71A6NGG8 1288 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 BACH1O14867 736 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 AOC1P19801 751 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 CRYBB1P53674 252 aaPredicted RBP11.89□□□□□ -0.51
COPB1-207ENST00000529866 RARS2Q5T160 578 aaKnown RBP11.89□□□□□ -0.51
COPB1-207ENST00000529866 CCDC105Q8IYK2 499 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 KIAA0319LQ8IZA0 1049 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 MRPL43Q8N983 215 aaKnown RBP11.89□□□□□ -0.51
COPB1-207ENST00000529866 KCNG4Q8TDN1 519 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 ACSF2Q96CM8 615 aaPredicted RBP11.89□□□□□ -0.51
COPB1-207ENST00000529866 CASD1Q96PB1 797 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 OSMRQ99650 979 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 RTP3Q9BQQ7 232 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 SMOC2Q9H3U7 446 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 LIMD1Q9UGP4 676 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 CDH22Q9UJ99 828 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 PCDHA6Q9UN73 950 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 PCDHA8Q9Y5H6 950 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 ZNF292O60281 2723 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 COL1A2P08123 1366 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 WDR87Q6ZQQ6 2873 aa11.89□□□□□ -0.51
COPB1-207ENST00000529866 BAZ2BQ9UIF8 2168 aaKnown RBP11.88□□□□□ -0.51
COPB1-207ENST00000529866 CARNS1A5YM72 827 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
COPB1-207ENST00000529866 EOMESO95936 686 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 ZSCAN20P17040 1043 aaPredicted RBP11.88□□□□□ -0.51
COPB1-207ENST00000529866 PBX3P40426 434 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 FAM189BP81408 668 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 ANGPT1Q15389 498 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 UBE2SQ16763 222 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 ZNF484Q5JVG2 852 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 CWF19L1Q69YN2 538 aaKnown RBP11.88□□□□□ -0.51
COPB1-207ENST00000529866 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 FAM228AQ86W67 206 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 MXRA8Q9BRK3 442 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 MRPL9Q9BYD2 267 aaKnown RBP11.88□□□□□ -0.51
COPB1-207ENST00000529866 CYP26B1Q9NR63 512 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 CEP250Q9BV73 2442 aa11.88□□□□□ -0.51
COPB1-207ENST00000529866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
COPB1-207ENST00000529866 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 LMNAP02545 664 aaKnown RBP11.87□□□□□ -0.51
COPB1-207ENST00000529866 CYP21A2P08686 494 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 RFX1P22670 979 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 ALDH7A1P49419 539 aaKnown RBP11.87□□□□□ -0.51
COPB1-207ENST00000529866 GIT2Q14161 759 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 PDXDC2PQ6P474 469 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 CCDC149Q6ZUS6 474 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 OTOP3Q7RTS5 596 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 SLC39A11Q8N1S5 342 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
COPB1-207ENST00000529866 DTWD2Q8NBA8 298 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 RSPH1Q8WYR4 309 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 TMEM169Q96HH4 297 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 PPP1R16BQ96T49 567 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 MYL10Q9BUA6 226 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 CDHR5Q9HBB8 845 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 KIAA1671Q9BY89 1806 aa11.87□□□□□ -0.51
COPB1-207ENST00000529866 IGKV6D-21A0A0A0MT36 114 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 E7EWF7 191 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 ATG7O95352 703 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 WEE2P0C1S8 567 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 ITGB3BPQ13352 177 aaPredicted RBP11.86□□□□□ -0.51
COPB1-207ENST00000529866 TDGQ13569 410 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 DSC3Q14574 896 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 TTC22Q5TAA0 569 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 MIS18BP1Q6P0N0 1132 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 HEATR3Q7Z4Q2 680 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 CABP7Q86V35 215 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 TEX2Q8IWB9 1127 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 CKAP2LQ8IYA6 745 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 METTL13Q8N6R0 699 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 RNF169Q8NCN4 708 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 AGO4Q9HCK5 861 aaKnown RBP11.86□□□□□ -0.51
COPB1-207ENST00000529866 ZNF302Q9NR11 478 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 DUSP12Q9UNI6 340 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 CEP131Q9UPN4 1083 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 PLXNA4Q9HCM2 1894 aa11.86□□□□□ -0.51
COPB1-207ENST00000529866 ACACBO00763 2458 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 DNAH14Q0VDD8 3507 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 GPR32O75388 356 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 PLEKHA8P1O95397 391 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 C22orf31O95567 290 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms