RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 YBX2Q9Y2T7 364 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-218ENST00000529566 CHD9Q3L8U1 2897 aa18.05■□□□□ 0.48
TSPAN4-218ENST00000529566 PTPRSQ13332 1948 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 M0QZ92 97 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 LAD1O00515 517 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 MED24O75448 989 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 MYOGP15173 224 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 TMOD1P28289 359 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 CD52P31358 61 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 PRPHP41219 470 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 CRYBB1P53674 252 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 ATP2C1P98194 919 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 KIZQ2M2Z5 673 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 TMCO2Q7Z6W1 182 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 FERMT3Q86UX7 667 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 HSCBQ8IWL3 235 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 DEFB123Q8N688 67 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 CEP170P1Q96L14 293 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 SEMA6BQ9H3T3 888 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 DHX33Q9H6R0 707 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 TUFT1Q9NNX1 390 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 PADI3Q9ULW8 664 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 PPME1Q9Y570 386 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 PCDHA11Q9Y5I1 949 aa18.04■□□□□ 0.48
TSPAN4-218ENST00000529566 A0A087WWV3 80 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 VPS37CA5D8V6 355 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 XRCC6P12956 609 aaKnown RBP eCLIP18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 RPA1P27694 616 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 KCNJ6P48051 423 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 NLRP11P59045 1033 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 RESTQ13127 1097 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 OTUD6AQ7L8S5 288 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 RTN4RL1Q86UN2 441 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 TIFAQ96CG3 184 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 PPP1R16BQ96T49 567 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 TMX1Q9H3N1 280 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 ANKEF1Q9NU02 776 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 AKT3Q9Y243 479 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 NOC2LQ9Y3T9 749 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 CDH23Q9H251 3354 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 MICAL3Q7RTP6 2002 aa18.03■□□□□ 0.48
TSPAN4-218ENST00000529566 LOXHD1Q8IVV2 1947 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 TMEM265A0A087WTH1 108 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 ENPP3O14638 875 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 GPC3P51654 580 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 RAB30Q15771 203 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 ECM1Q16610 540 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 TMEM266Q2M3C6 531 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 ZNF710Q8N1W2 664 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 PIGOQ8TEQ8 1089 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 LINC01599Q8WXQ3 324 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 MAP7D2Q96T17 732 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 OSMRQ99650 979 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 ERVK-5Q9HDB9 667 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 MSRAQ9UJ68 235 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
TSPAN4-218ENST00000529566 STX6O43752 255 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 GJB5O95377 273 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 SLC34A2O95436 690 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 RFC5P40937 340 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 XKR9Q5GH70 373 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 CRIPAKQ8N1N5 446 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 ERMNQ8TAM6 284 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 TOP1MTQ969P6 601 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 JPH2Q9BR39 696 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 NKX2-4Q9H2Z4 354 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 XPNPEP1Q9NQW7 623 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 SUCLA2Q9P2R7 463 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 LRWD1Q9UFC0 647 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 CHD7Q9P2D1 2997 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 GBF1Q92538 1859 aa18.01■□□□□ 0.47
TSPAN4-218ENST00000529566 RPS6KA5O75582 802 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 ARHGEF15O94989 841 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 AMHP03971 560 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 MUTP22033 750 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 RARRES1P49788 294 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 DNM2P50570 870 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 PAK2Q13177 524 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 ARL6IP4Q66PJ3 421 aaKnown RBP18■□□□□ 0.47
TSPAN4-218ENST00000529566 POTEGQ6S5H5 508 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 DTHD1Q6ZMT9 781 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 FAM228AQ86W67 206 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 EXOC8Q8IYI6 725 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 ZNF668Q96K58 619 aaPredicted RBP18■□□□□ 0.47
TSPAN4-218ENST00000529566 GUCD1Q96NT3 240 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 MMTAG2Q9BU76 263 aaKnown RBP18■□□□□ 0.47
TSPAN4-218ENST00000529566 TSPYL2Q9H2G4 693 aaPredicted RBP18■□□□□ 0.47
TSPAN4-218ENST00000529566 ZNF576Q9H609 170 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 DBR1Q9UK59 544 aaKnown RBP18■□□□□ 0.47
TSPAN4-218ENST00000529566 ST3GAL5Q9UNP4 418 aa18■□□□□ 0.47
TSPAN4-218ENST00000529566 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 MGEA5O60502 916 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 DARSP14868 501 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 EIF4BP23588 611 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 CDC25AP30304 524 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 POLGP54098 1239 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms