RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 TECP42680 631 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 CRYBB1P53674 252 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-211ENST00000528563 NPEPPSP55786 919 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 PTGDRQ13258 359 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 KIZQ2M2Z5 673 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 TMEM40Q8WWA1 233 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 GUCD1Q96NT3 240 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 NKX2-4Q9H2Z4 354 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 SLC28A3Q9HAS3 691 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 PADI3Q9ULW8 664 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 MYO9BQ13459 2157 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 POTEMA6NI47 508 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 GJB5O95377 273 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 AMHP03971 560 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 SPATA31C1P0DKV0 1188 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 YWHABP31946 246 aaKnown RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 NLRP11P59045 1033 aaKnown RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 DRP2Q13474 957 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 PLA2G4FQ68DD2 849 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 FAM43BQ6ZT52 329 aaPredicted RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 OTUD6AQ7L8S5 288 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 RTN4RL1Q86UN2 441 aaPredicted RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 NEK9Q8TD19 979 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 TOP1MTQ969P6 601 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 MAP7D2Q96T17 732 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 GINS2Q9Y248 185 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 NOC2LQ9Y3T9 749 aaKnown RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 PTPRSQ13332 1948 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 GBF1Q92538 1859 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 MICAL3Q7RTP6 2002 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 PDCP20941 246 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 GRIN2CQ14957 1233 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 CEP170P1Q96L14 293 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 CDX2Q99626 313 aaPredicted RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 RAD9AQ99638 391 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 ZBED2Q9BTP6 218 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 DHX33Q9H6R0 707 aaKnown RBP18.84■□□□□ 0.61
HIF3A-211ENST00000528563 AKT3Q9Y243 479 aa18.84■□□□□ 0.61
HIF3A-211ENST00000528563 LOXHD1Q8IVV2 1947 aa18.83■□□□□ 0.61
HIF3A-211ENST00000528563 TLL1O43897 1013 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 CA3P07451 260 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 XRCC6P12956 609 aaKnown RBP eCLIP18.83■□□□□ 0.6
HIF3A-211ENST00000528563 DNM2P50570 870 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 FXR2P51116 673 aaKnown RBP eCLIP18.83■□□□□ 0.6
HIF3A-211ENST00000528563 PDIA5Q14554 519 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 CATSPER3Q86XQ3 398 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 EXOC8Q8IYI6 725 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 MYOCDQ8IZQ8 938 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 PPP1R16BQ96T49 567 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 ERVK-5Q9HDB9 667 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 ANKEF1Q9NU02 776 aa18.83■□□□□ 0.6
HIF3A-211ENST00000528563 LAD1O00515 517 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 RFC5P40937 340 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 CDC42EP1Q00587 391 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 PAK2Q13177 524 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 TMEM266Q2M3C6 531 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 XKR9Q5GH70 373 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 OSMRQ99650 979 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 JPH2Q9BR39 696 aaPredicted RBP18.82■□□□□ 0.6
HIF3A-211ENST00000528563 POLR3CQ9BUI4 534 aaPredicted RBP18.82■□□□□ 0.6
HIF3A-211ENST00000528563 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 TMX1Q9H3N1 280 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 TUFT1Q9NNX1 390 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 ST3GAL5Q9UNP4 418 aa18.82■□□□□ 0.6
HIF3A-211ENST00000528563 GPR182O15218 404 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 RPS6KA5O75582 802 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 SYT1P21579 422 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 EIF4BP23588 611 aaKnown RBP18.81■□□□□ 0.6
HIF3A-211ENST00000528563 PRPHP41219 470 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 GPC3P51654 580 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 HTRA4P83105 476 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-211ENST00000528563 IL17AQ16552 155 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 FAM117BQ6P1L5 589 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 CRIPAKQ8N1N5 446 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 IGSF22Q8N9C0 903 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 LINC01599Q8WXQ3 324 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 SLC7A3Q8WY07 619 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 TSPYL2Q9H2G4 693 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-211ENST00000528563 SUCLA2Q9P2R7 463 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-211ENST00000528563 STXBP5LQ9Y2K9 1186 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 INSL6Q9Y581 213 aa18.81■□□□□ 0.6
HIF3A-211ENST00000528563 A0A087WWV3 80 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 LCHNA4D1U4 455 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 MED24O75448 989 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 ARHGEF15O94989 841 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 RPA1P27694 616 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 TAP1Q03518 808 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 NFX1Q12986 1120 aaKnown RBP18.8■□□□□ 0.6
HIF3A-211ENST00000528563 ODR4Q5SWX8 454 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 BRAPQ7Z569 592 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 TTC3P53804 2025 aa18.8■□□□□ 0.6
HIF3A-211ENST00000528563 DARSP14868 501 aaKnown RBP18.79■□□□□ 0.6
HIF3A-211ENST00000528563 POLGP54098 1239 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-211ENST00000528563 ATP2C1P98194 919 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-211ENST00000528563 FAM228AQ86W67 206 aa18.79■□□□□ 0.6
HIF3A-211ENST00000528563 ERMNQ8TAM6 284 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms