RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 LRRC53A6NM62 1247 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 SPATA31C2B4DYI2 1134 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 MAPK13O15264 365 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 AKR1B10O60218 316 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 EIF3JO75822 258 aaKnown RBP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 ICAM3P32942 547 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 HSP90AA2PQ14568 343 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 EXOC3L4Q17RC7 722 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 ERO1BQ86YB8 467 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 RIOX2Q8IUF8 465 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 FAM186BQ8IYM0 893 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 ANKRD13AQ8IZ07 590 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 SYCP3Q8IZU3 236 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 VTI1AQ96AJ9 217 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 BORCS6Q96GS4 357 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 WNK4Q96J92 1243 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 A1CFQ9NQ94 594 aaKnown RBP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 PKD2L1Q9P0L9 805 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 ATP9AO75110 1047 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 NOL4O94818 638 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 SMTNP53814 917 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 HERVK_113P62684 666 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 STXBP2Q15833 593 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 C10orf76Q5T2E6 689 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 ARHGAP20Q9P2F6 1191 aa16.19■□□□□ 0.18
ECHDC1-220ENST00000528402 PTPRFP10586 1907 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 KIAA1217Q5T5P2 1943 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 ZC3H4Q9UPT8 1303 aaKnown RBP16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 ANO9A1A5B4 782 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 UNCXA6NJT0 531 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 H0YCG3 227 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 RBAK-RBAKDNI3L0D1 243 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 EPHB6O15197 1021 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 SLC25A27O95847 323 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 KCNA2P16389 499 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 EIF4A3P38919 411 aaKnown RBP16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 KIF11P52732 1056 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 RTP1P59025 263 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 POLR2FP61218 127 aaKnown RBP16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 GTF2BQ00403 316 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 PLS1Q14651 629 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 WHAMMP3Q1A5X7 153 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 XKR9Q5GH70 373 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 MIS18BP1Q6P0N0 1132 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 DAW1Q8N136 415 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 TSC1Q92574 1164 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 KIFAP3Q92845 792 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 SLC35C1Q96A29 364 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 PURBQ96QR8 312 aaKnown RBP16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 GANQ9H2C0 597 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 SLC9A2Q9UBY0 812 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 GUCA1BQ9UMX6 200 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 LOC285556D6RIA3 1793 aa16.18■□□□□ 0.18
ECHDC1-220ENST00000528402 ZMYM2Q9UBW7 1377 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 A0A0G2JLL6 359 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 K7ENM7 598 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 IRF6O14896 467 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 CLIC2O15247 247 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 FANCGO15287 622 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 P4HA2O15460 535 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 PJA2O43164 708 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 N4BP1O75113 896 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 CCNE2O96020 404 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 MCCD1P59942 119 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 ZC2HC1CQ53FD0 456 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 KLHDC7AQ5VTJ3 777 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 PRRT2Q7Z6L0 340 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 RNF10Q8N5U6 811 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 NTPCRQ9BSD7 190 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 CARD6Q9BX69 1037 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 IRX2Q9BZI1 471 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 WDR81Q562E7 1941 aa16.17■□□□□ 0.18
ECHDC1-220ENST00000528402 PAPPA2Q9BXP8 1791 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 TADA3O75528 432 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 CCDC172P0C7W6 258 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 KRT13P13646 458 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 RFX1P22670 979 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 PON1P27169 355 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 MAGEA1P43355 309 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 NCKAP1LP55160 1127 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 ENPEPQ07075 957 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 CETN1Q12798 172 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 PRKG1Q13976 671 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 ASIC2Q16515 512 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 TCERG1LQ5VWI1 586 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms