RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 JPH2Q9BR39 696 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 NOC2LQ9Y3T9 749 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 COL4A6Q14031 1691 aa13.59□□□□□ -0.23
TRAPPC4-209ENST00000528230 MAFO75444 373 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 UPP2O95045 317 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 VTNP04004 478 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 IGFBP4P22692 258 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 TRAPPC10P48553 1259 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 DNM2P50570 870 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 CLCN3P51790 818 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 NFX1Q12986 1120 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 MTERF2Q49AM1 385 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 ANO5Q75V66 913 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 OTUD6AQ7L8S5 288 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 CRIPAKQ8N1N5 446 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 ARNTL2Q8WYA1 636 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 SAMD11Q96NU1 681 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 YME1L1Q96TA2 773 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 ADAMTS10Q9H324 1103 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZSWIM4Q9H7M6 989 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 SUGCTQ9HAC7 445 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 LMCD1Q9NZU5 365 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 ST3GAL5Q9UNP4 418 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 AKT3Q9Y243 479 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 GINS2Q9Y248 185 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 RALGAPA2Q2PPJ7 1873 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
TRAPPC4-209ENST00000528230 RBAK-RBAKDNI3L0D1 243 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 WNT7AO00755 349 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 SLITRK3O94933 977 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 U2AF2P26368 475 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 TXKP42681 527 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 GNL2Q13823 731 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 NCAPH2Q6IBW4 605 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 NOSTRINQ8IVI9 506 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 LRRC71Q8N4P6 559 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 TMEM40Q8WWA1 233 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 LINC01599Q8WXQ3 324 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 OSMRQ99650 979 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 HSD17B14Q9BPX1 270 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 TMX1Q9H3N1 280 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 CYP26B1Q9NR63 512 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 C1orf112Q9NSG2 853 aa13.57□□□□□ -0.24
TRAPPC4-209ENST00000528230 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 EPOPA6NHQ4 379 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 RFXAPO00287 272 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 DGKIO75912 1065 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 LYPLA2O95372 231 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 CD2BP2O95400 341 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 YWHABP31946 246 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 MCM7P33993 719 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 RFC5P40937 340 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 GPC3P51654 580 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 NPAS4Q8IUM7 802 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZNF689Q96CS4 500 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 CEP170P1Q96L14 293 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 LXNQ9BS40 222 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 TMEM60Q9H2L4 133 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 RC3H2Q9HBD1 1191 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 RGS18Q9NS28 235 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 RGL1Q9NZL6 768 aa13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 WRAP73Q9P2S5 460 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 NOL7Q9UMY1 257 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-209ENST00000528230 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 GAS2O43903 313 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 LPXNO60711 386 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 DARSP14868 501 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 SARSP49591 514 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 GRB10Q13322 594 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 TTC38Q5R3I4 469 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZNF410Q86VK4 478 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 TPH2Q8IWU9 490 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 SLC7A3Q8WY07 619 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 ADAM2Q99965 735 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 SUCLA2Q9P2R7 463 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms