RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 PSD3Q9NYI0 1048 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 WRAP73Q9P2S5 460 aaPredicted RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 GRID2IPA4D2P6 1211 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 LRRIQ3A6PVS8 624 aaPredicted RBP16.78■□□□□ 0.28
USH1C-207ENST00000527720 ZBTB39O15060 712 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 PALMO75781 387 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 FLOT1O75955 427 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 GFPT2O94808 682 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 ITGB5P18084 799 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 POLD1P28340 1107 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
USH1C-207ENST00000527720 ALCAMQ13740 583 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 TNFAIP1Q13829 316 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 HSP90B2PQ58FF3 399 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 MEI1Q5TIA1 1274 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 SLC30A10Q6XR72 485 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 TMEM174Q8WUU8 243 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 KIAA1683Q9H0B3 1180 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 FRMD4BQ9Y2L6 1034 aa16.78■□□□□ 0.28
USH1C-207ENST00000527720 CES2O00748 559 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 PPP1R37O75864 691 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
USH1C-207ENST00000527720 FERP16591 822 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 NBPF9Q3BBW0 867 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 ZC2HC1CQ53FD0 456 aaPredicted RBP16.77■□□□□ 0.28
USH1C-207ENST00000527720 PCNX4Q63HM2 1172 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 MIER3Q7Z3K6 550 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 POLD4Q9HCU8 107 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 KCNH7Q9NS40 1196 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.28
USH1C-207ENST00000527720 INTUQ9ULD6 942 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 WDR81Q562E7 1941 aa16.77■□□□□ 0.28
USH1C-207ENST00000527720 NCK2O43639 380 aa16.77■□□□□ 0.27
USH1C-207ENST00000527720 RBM46Q8TBY0 533 aaKnown RBP16.77■□□□□ 0.27
USH1C-207ENST00000527720 HOOK2Q96ED9 719 aa16.77■□□□□ 0.27
USH1C-207ENST00000527720 AGPAT3Q9NRZ7 376 aa16.77■□□□□ 0.27
USH1C-207ENST00000527720 NAGPAQ9UK23 515 aa16.77■□□□□ 0.27
USH1C-207ENST00000527720 NENFQ9UMX5 172 aa16.77■□□□□ 0.27
USH1C-207ENST00000527720 UBIAD1Q9Y5Z9 338 aa16.77■□□□□ 0.27
USH1C-207ENST00000527720 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
USH1C-207ENST00000527720 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
USH1C-207ENST00000527720 BANK1Q8NDB2 785 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 LYPLA2O95372 231 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 TNFRSF8P28908 595 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 CXCR5P32302 372 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 STAT1P42224 750 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 FMO5P49326 533 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 MAPK7Q13164 816 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 RASA3Q14644 834 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 ALKBH5Q6P6C2 394 aaKnown RBP16.76■□□□□ 0.27
USH1C-207ENST00000527720 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
USH1C-207ENST00000527720 SLC38A10Q9HBR0 1119 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 COL20A1Q9P218 1284 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 ADAM21Q9UKJ8 722 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
USH1C-207ENST00000527720 A0A0A6YYK5 440 aaPredicted RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 NFIBO00712 420 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 DHX15O43143 795 aaKnown RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 HIP1RO75146 1068 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 FDX1P10109 184 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 PADI6Q6TGC4 694 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 AENQ8WTP8 325 aaKnown RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 TIPINQ9BVW5 301 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 AGO4Q9HCK5 861 aaKnown RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 TBC1D22BQ9NU19 505 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 LARSQ9P2J5 1176 aaKnown RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 ZHX1Q9UKY1 873 aaPredicted RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 HPCAL4Q9UM19 191 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 CCDC66A2RUB6 948 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 RFX1P22670 979 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 TNNT3P45378 269 aaPredicted RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 ZNF280AP59817 542 aaPredicted RBP16.75■□□□□ 0.27
USH1C-207ENST00000527720 CCDC102AQ96A19 550 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 STK33Q9BYT3 514 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 PIM2Q9P1W9 311 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 STIM2Q9P246 746 aa16.75■□□□□ 0.27
USH1C-207ENST00000527720 A0A0U1RQG5 324 aaPredicted RBP16.74■□□□□ 0.27
USH1C-207ENST00000527720 CCDC172P0C7W6 258 aa16.74■□□□□ 0.27
USH1C-207ENST00000527720 RPS12P25398 132 aaKnown RBP16.74■□□□□ 0.27
USH1C-207ENST00000527720 DAW1Q8N136 415 aa16.74■□□□□ 0.27
USH1C-207ENST00000527720 JDP2Q8WYK2 163 aa16.74■□□□□ 0.27
USH1C-207ENST00000527720 PSMB7Q99436 277 aa16.74■□□□□ 0.27
USH1C-207ENST00000527720 SELENOOQ9BVL4 669 aa16.74■□□□□ 0.27
USH1C-207ENST00000527720 SOX5P35711 763 aa16.73■□□□□ 0.27
USH1C-207ENST00000527720 QARSP47897 775 aaKnown RBP16.73■□□□□ 0.27
USH1C-207ENST00000527720 TGFB2P61812 414 aa16.73■□□□□ 0.27
USH1C-207ENST00000527720 SNRPFP62306 86 aaKnown RBP16.73■□□□□ 0.27
USH1C-207ENST00000527720 COG2Q14746 738 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms