RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NOSTRINQ8IVI9 506 aa29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 SP7Q8TDD2 431 aaPredicted RBP29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 TMEM40Q8WWA1 233 aa29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 ARNTL2Q8WYA1 636 aa29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 YME1L1Q96TA2 773 aa29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 TTC12Q9H892 705 aaPredicted RBP29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 NOC2LQ9Y3T9 749 aaKnown RBP29.56■■■□□ 2.32
TSPAN4-217ENST00000527644 LINC01553A4QN01 128 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 TMEM150BA6NC51 233 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 GPR182O15218 404 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 IGFBP4P22692 258 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 MCM7P33993 719 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 TXKP42681 527 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 NFX1Q12986 1120 aaKnown RBP29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 ORC2Q13416 577 aaPredicted RBP29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 TMEM266Q2M3C6 531 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 C4orf19Q8IY42 314 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 PPP1R16BQ96T49 567 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 OSMRQ99650 979 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 LXNQ9BS40 222 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 ERVK-5Q9HDB9 667 aa29.55■■■□□ 2.32
TSPAN4-217ENST00000527644 IGKV6-21A0A0C4DH24 114 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 NLRP11P59045 1033 aaKnown RBP29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 RTN4RL1Q86UN2 441 aaPredicted RBP29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 SLC17A8Q8NDX2 589 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 LINC01599Q8WXQ3 324 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 DYDC2Q96IM9 177 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 TGS1Q96RS0 853 aaKnown RBP29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 TSPYL2Q9H2G4 693 aaPredicted RBP29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 ADAMTS10Q9H324 1103 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 ZSWIM4Q9H7M6 989 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 RGL1Q9NZL6 768 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 WRAP73Q9P2S5 460 aaPredicted RBP29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 PPME1Q9Y570 386 aa29.54■■■□□ 2.32
TSPAN4-217ENST00000527644 MAFO75444 373 aaPredicted RBP29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 U2AF2P26368 475 aaKnown RBP eCLIP29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 TRAPPC10P48553 1259 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 DNM2P50570 870 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 ERVK-21P61565 698 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 CDC42EP1Q00587 391 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 JPH2Q9BR39 696 aaPredicted RBP29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 SH2D3AQ9BRG2 576 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 TMEM60Q9H2L4 133 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 TMX1Q9H3N1 280 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 CYP26B1Q9NR63 512 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 ST3GAL5Q9UNP4 418 aa29.53■■■□□ 2.32
TSPAN4-217ENST00000527644 EPOPA6NHQ4 379 aa29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 PLA2G4FQ68DD2 849 aa29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 OTUD6AQ7L8S5 288 aa29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 SPRED2Q7Z698 418 aa29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 EXOC8Q8IYI6 725 aa29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 EIF2AK1Q9BQI3 630 aaKnown RBP29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 NOL7Q9UMY1 257 aaKnown RBP29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 TTC3P53804 2025 aa29.52■■■□□ 2.32
TSPAN4-217ENST00000527644 RFXAPO00287 272 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 SLITRK3O94933 977 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 POU3F3P20264 500 aaPredicted RBP29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 YWHABP31946 246 aaKnown RBP29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 GPC3P51654 580 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 CTTNQ14247 550 aaKnown RBP29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 ZNF174Q15697 407 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 NEK9Q8TD19 979 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 CEP170P1Q96L14 293 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 HSD17B14Q9BPX1 270 aa29.51■■■□□ 2.31
TSPAN4-217ENST00000527644 EIF4BP23588 611 aaKnown RBP29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 NPEPPSP55786 919 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 CYP4A11Q02928 519 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 DRP2Q13474 957 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 TTC38Q5R3I4 469 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 FAM228AQ86W67 206 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 TPH2Q8IWU9 490 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 GTF3C3Q9Y5Q9 886 aa29.5■■■□□ 2.31
TSPAN4-217ENST00000527644 GJB2P29033 226 aa29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 NPAS4Q8IUM7 802 aa29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 CRIPAKQ8N1N5 446 aa29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 SLC7A3Q8WY07 619 aa29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 SAMD11Q96NU1 681 aa29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 COL4A6Q14031 1691 aa29.49■■■□□ 2.31
TSPAN4-217ENST00000527644 TRANK1O15050 2925 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 GTPBP6O43824 516 aaPredicted RBP29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 LYPLA2O95372 231 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 STAG3L1P0CL83 205 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 RFC5P40937 340 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 NLRP7Q8WX94 980 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 SCLT1Q96NL6 688 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 RGS18Q9NS28 235 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 C1orf112Q9NSG2 853 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 SUCLA2Q9P2R7 463 aaPredicted RBP29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 MTUS1Q9ULD2 1270 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 SMC3Q9UQE7 1217 aa29.48■■■□□ 2.31
TSPAN4-217ENST00000527644 DENND3A2RUS2 1198 aa29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 MGEA5O60502 916 aa29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 DGKIO75912 1065 aa29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 OR52Z1P0C646 297 aa29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 DARSP14868 501 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 GRB10Q13322 594 aa29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 ZNF579Q8NAF0 562 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 ZNF689Q96CS4 500 aaPredicted RBP29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 ADAM2Q99965 735 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms