RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 TMEM98Q9Y2Y6 226 aa7.09□□□□□ -1.27
NXF1-205ENST00000527497 AFG3L2Q9Y4W6 797 aa7.09□□□□□ -1.27
NXF1-205ENST00000527497 PCDHGB2Q9Y5G2 931 aa7.09□□□□□ -1.27
NXF1-205ENST00000527497 CCDC154A6NI56 674 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 EYA2O00167 538 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 SKAP2O75563 359 aaPredicted RBP7.08□□□□□ -1.28
NXF1-205ENST00000527497 FGF18O76093 207 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 IFIT1P09914 478 aaKnown RBP7.08□□□□□ -1.28
NXF1-205ENST00000527497 CLEC2LP0C7M8 214 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 ARL4CP56559 192 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 DUSP4Q13115 394 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 TAF12Q16514 161 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
NXF1-205ENST00000527497 RTP2Q5QGT7 225 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 CCDC62Q6P9F0 684 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 FAM26EQ8N5C1 309 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 CXorf38Q8TB03 319 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 HDAC2Q92769 488 aaKnown RBP7.08□□□□□ -1.28
NXF1-205ENST00000527497 TCTN2Q96GX1 697 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 ZSCAN31Q96LW9 406 aaPredicted RBP7.08□□□□□ -1.28
NXF1-205ENST00000527497 JAM3Q9BX67 310 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 C22orf23Q9BZE7 217 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 IFT122Q9HBG6 1241 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 ALG13Q9NP73 1137 aaKnown RBP7.08□□□□□ -1.28
NXF1-205ENST00000527497 KCNH7Q9NS40 1196 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 TBC1D22BQ9NU19 505 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 DAGLAQ9Y4D2 1042 aa7.08□□□□□ -1.28
NXF1-205ENST00000527497 TCRBV5S4A2TA0A5A2 114 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 POM121BA6NF01 834 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 FGF10O15520 208 aaPredicted RBP7.07□□□□□ -1.28
NXF1-205ENST00000527497 FFAR2O15552 330 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 HTRA2O43464 458 aaPredicted RBP7.07□□□□□ -1.28
NXF1-205ENST00000527497 EOMESO95936 686 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 THP07101 528 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 NID1P14543 1247 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 RAB6AP20340 208 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 RXRBP28702 533 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 CCDC184Q52MB2 194 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 SFRP5Q5T4F7 317 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 CPZQ66K79 652 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 C4orf50Q6ZRC1 276 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 TBC1D1Q86TI0 1168 aaPredicted RBP7.07□□□□□ -1.28
NXF1-205ENST00000527497 CACNA2D3Q8IZS8 1091 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 NLGN4XQ8N0W4 816 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 SLC30A5Q8TAD4 765 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 PTCHD1Q96NR3 888 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 PTPN18Q99952 460 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 COLEC11Q9BWP8 271 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 UNKQ9C0B0 810 aaKnown RBP7.07□□□□□ -1.28
NXF1-205ENST00000527497 PNPLA8Q9NP80 782 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 BLOC1S4Q9NUP1 217 aa7.07□□□□□ -1.28
NXF1-205ENST00000527497 A0A088AWK7 358 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 SHISA8B8ZZ34 492 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 EIF3FO00303 357 aaPredicted RBP7.06□□□□□ -1.28
NXF1-205ENST00000527497 DDX3XO00571 662 aaKnown RBP eCLIP7.06□□□□□ -1.28
NXF1-205ENST00000527497 NPHS1O60500 1241 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 CD4P01730 458 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TMEM253P0C7T8 217 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TSHRP16473 764 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 ENDOUP21128 410 aaKnown RBP7.06□□□□□ -1.28
NXF1-205ENST00000527497 EDNRBP24530 442 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 POLD1P28340 1107 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 LAPTM5Q13571 262 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 PRKG1Q13976 671 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TMEM132BQ14DG7 1078 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 PITRM1Q5JRX3 1037 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 WDR45BQ5MNZ6 344 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TSHZ3Q63HK5 1081 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 HIBCHQ6NVY1 386 aaPredicted RBP7.06□□□□□ -1.28
NXF1-205ENST00000527497 CHSY3Q70JA7 882 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 BRINP3Q76B58 766 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 FBXO11Q86XK2 927 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 CPNE8Q86YQ8 564 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 OR8H2Q8N162 312 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 PIWIL2Q8TC59 973 aaKnown RBP7.06□□□□□ -1.28
NXF1-205ENST00000527497 RIN2Q8WYP3 895 aaPredicted RBP7.06□□□□□ -1.28
NXF1-205ENST00000527497 DDX11Q96FC9 970 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TTC14Q96N46 770 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TRIT1Q9H3H1 467 aaKnown RBP7.06□□□□□ -1.28
NXF1-205ENST00000527497 RIC8AQ9NPQ8 531 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 CCDC39Q9UFE4 941 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 TTLL3Q9Y4R7 772 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 ATP23Q9Y6H3 246 aa7.06□□□□□ -1.28
NXF1-205ENST00000527497 A0A1W2PRQ8 180 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 C7orf72A4D263 438 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 WTIPA6NIX2 430 aaPredicted RBP7.05□□□□□ -1.28
NXF1-205ENST00000527497 IRAK2O43187 625 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 LPLP06858 475 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 COL6A2P12110 1019 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 PDIA3P30101 505 aaKnown RBP7.05□□□□□ -1.28
NXF1-205ENST00000527497 SDHAP31040 664 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 ELF1P32519 619 aa7.05□□□□□ -1.28
NXF1-205ENST00000527497 WASP42768 502 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms