RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 HAS1Q92839 578 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 NECAB3Q96P71 396 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 SH2D3AQ9BRG2 576 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 FTHL17Q9BXU8 183 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 KCNMB3Q9NPA1 279 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 NRBP2Q9NSY0 501 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 TCEAL9Q9UHQ7 104 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 VAV3Q9UKW4 847 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 ADGRA3Q8IWK6 1321 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 NLRC5Q86WI3 1866 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 CCDC194A0A1B0GVG4 234 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 C5orf67F2Z3F1 127 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 GRM6O15303 877 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 RPS6KA5O75582 802 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 BMPR1AP36894 532 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 BTG3Q14201 252 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 DSC3Q14574 896 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 NEK8Q86SG6 692 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 RDM1Q8NG50 284 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 HLA-CQ95604 372 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 MRPL38Q96DV4 380 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 KIF2CQ99661 725 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 NIFKQ9BYG3 293 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 RGS18Q9NS28 235 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 COG5Q9UP83 839 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 MRPL42Q9Y6G3 142 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-204ENST00000527253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 IGKV6-21A0A0C4DH24 114 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 C9IYK1 514 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 WNT7AO00755 349 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 IBSPP21815 317 aaPredicted RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 CTNNB1P35222 781 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 GPC3P51654 580 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 FOSBP53539 338 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 NLRP11P59045 1033 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 FAM189BP81408 668 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 CMTR2Q8IYT2 770 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 ADAM2Q99965 735 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 WRAP73Q9P2S5 460 aaPredicted RBP11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
PRPF40B-204ENST00000527253 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 GPR182O15218 404 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 RB1P06400 928 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 XBP1P17861 261 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 FGFR4P22455 802 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 DNAJB1P25685 340 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 PSMC5P62195 406 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 SPIRE1Q08AE8 756 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 PPP2R5CQ13362 524 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 CAMK1Q14012 370 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 PAN2Q504Q3 1202 aaKnown RBP11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 TCEAL5Q5H9L2 206 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 FAM102BQ5T8I3 360 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 ANO5Q75V66 913 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 WASF1Q92558 559 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 FAM20AQ96MK3 541 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 UHRF1Q96T88 793 aaPredicted RBP11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 RNF19AQ9NV58 838 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 SEPT9Q9UHD8 586 aaPredicted RBP11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 RALGAPA2Q2PPJ7 1873 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 ATG2AQ2TAZ0 1938 aa11.74□□□□□ -0.53
PRPF40B-204ENST00000527253 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 MMP1P03956 469 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 DARSP14868 501 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 GCFC2P16383 781 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 KRT2P35908 639 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 NPEPPSP55786 919 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 TBC1D8BQ0IIM8 1120 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 PTPROQ16827 1216 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 PLA2G4FQ68DD2 849 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 SLC24A5Q71RS6 500 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 ALG13Q9NP73 1137 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 PLAGL2Q9UPG8 496 aa11.73□□□□□ -0.53
PRPF40B-204ENST00000527253 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 DENND3A2RUS2 1198 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 ZBTB39O15060 712 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms