RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 HYIQ5T013 277 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 PLA2G4FQ68DD2 849 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 GPR153Q6NV75 609 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 TRMT1LQ7Z2T5 733 aaKnown RBP19.28■□□□□ 0.68
LMX1B-203ENST00000526117 METTL13Q8N6R0 699 aa19.28■□□□□ 0.68
LMX1B-203ENST00000526117 FTOQ9C0B1 505 aaKnown RBP eCLIP19.28■□□□□ 0.68
LMX1B-203ENST00000526117 F13A1P00488 732 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 LONP1P36776 959 aaKnown RBP19.27■□□□□ 0.68
LMX1B-203ENST00000526117 NASPP49321 788 aaPredicted RBP19.27■□□□□ 0.68
LMX1B-203ENST00000526117 CLCN3P51790 818 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 CRYBB1P53674 252 aaPredicted RBP19.27■□□□□ 0.68
LMX1B-203ENST00000526117 NPEPPSP55786 919 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 LPIN1Q14693 890 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 KRT79Q5XKE5 535 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 ATL3Q6DD88 541 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 PHOSPHO2Q8TCD6 241 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 SEPT8Q92599 483 aa19.27■□□□□ 0.68
LMX1B-203ENST00000526117 TET1Q8NFU7 2136 aa19.27■□□□□ 0.67
LMX1B-203ENST00000526117 TRIOBPQ9H2D6 2365 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 LOXHD1Q8IVV2 1947 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 DGAT1O75907 488 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 CCT6AP40227 531 aaKnown RBP19.26■□□□□ 0.67
LMX1B-203ENST00000526117 POLGP54098 1239 aaPredicted RBP19.26■□□□□ 0.67
LMX1B-203ENST00000526117 IKBKEQ14164 716 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 XKR9Q5GH70 373 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 ODR4Q5SWX8 454 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 OTOP2Q7RTS6 562 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 LRRC71Q8N4P6 559 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 DBF4BQ8NFT6 615 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 SNX29Q8TEQ0 813 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 SLC9A7Q96T83 725 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 MMTAG2Q9BU76 263 aaKnown RBP19.26■□□□□ 0.67
LMX1B-203ENST00000526117 IFIH1Q9BYX4 1025 aaKnown RBP19.26■□□□□ 0.67
LMX1B-203ENST00000526117 ADAMTS10Q9H324 1103 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 CXXC1Q9P0U4 656 aaPredicted RBP19.26■□□□□ 0.67
LMX1B-203ENST00000526117 CLIC4Q9Y696 253 aa19.26■□□□□ 0.67
LMX1B-203ENST00000526117 EVPLQ92817 2033 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.25■□□□□ 0.67
LMX1B-203ENST00000526117 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.25■□□□□ 0.67
LMX1B-203ENST00000526117 VWA3AA6NCI4 1184 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 ZBTB39O15060 712 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 GPC3P51654 580 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 SLC39A14Q15043 492 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 ZNF410Q86VK4 478 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
LMX1B-203ENST00000526117 TCP11Q8WWU5 503 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 ZNF396Q96N95 335 aaPredicted RBP19.25■□□□□ 0.67
LMX1B-203ENST00000526117 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 AKT3Q9Y243 479 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 SLC4A7Q9Y6M7 1214 aa19.25■□□□□ 0.67
LMX1B-203ENST00000526117 BRD1O95696 1058 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 VTNP04004 478 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 GHRP10912 638 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 FXR1P51114 621 aaKnown RBP eCLIP19.24■□□□□ 0.67
LMX1B-203ENST00000526117 WDR5P61964 334 aaKnown RBP19.24■□□□□ 0.67
LMX1B-203ENST00000526117 EMC2Q15006 297 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 TCTN1Q2MV58 587 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 FAM173BQ6P4H8 233 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 PIGOQ8TEQ8 1089 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 USP28Q96RU2 1077 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 SH2D3AQ9BRG2 576 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 FTHL17Q9BXU8 183 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 OSBPL7Q9BZF2 842 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 SUGCTQ9HAC7 445 aa19.24■□□□□ 0.67
LMX1B-203ENST00000526117 SRPRBQ9Y5M8 271 aaKnown RBP19.24■□□□□ 0.67
LMX1B-203ENST00000526117 ASAP2O43150 1006 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 YEATS4O95619 227 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 EIF4BP23588 611 aaKnown RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 NLRP11P59045 1033 aaKnown RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 POU5F1BQ06416 359 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 TMEM62Q0P6H9 643 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 DRP2Q13474 957 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 PKP1Q13835 747 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 ECM1Q16610 540 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 KIZQ2M2Z5 673 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 MCPH1Q8NEM0 835 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 PSPC1Q8WXF1 523 aaKnown RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 CCDC43Q96MW1 224 aaKnown RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 MTRQ99707 1265 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 AGO3Q9H9G7 860 aaKnown RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 ATP6V0A4Q9HBG4 840 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 XPNPEP1Q9NQW7 623 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 SUCLA2Q9P2R7 463 aaPredicted RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 FBXO2Q9UK22 296 aaPredicted RBP19.23■□□□□ 0.67
LMX1B-203ENST00000526117 MICAL3Q7RTP6 2002 aa19.23■□□□□ 0.67
LMX1B-203ENST00000526117 TMEM265A0A087WTH1 108 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 PP2D1A8MPX8 630 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 MXD4Q14582 209 aaPredicted RBP19.22■□□□□ 0.67
LMX1B-203ENST00000526117 FAM109BQ6ICB4 259 aaPredicted RBP19.22■□□□□ 0.67
LMX1B-203ENST00000526117 SPRYD3Q8NCJ5 442 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 LINC00301Q8NCQ3 95 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 TMEM40Q8WWA1 233 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 CCSER1Q9C0I3 900 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 CDHR5Q9HBB8 845 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 ERVK-5Q9HDB9 667 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 DDX19AQ9NUU7 478 aaKnown RBP19.22■□□□□ 0.67
LMX1B-203ENST00000526117 PADI3Q9ULW8 664 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 KIAA1024Q9UPX6 916 aa19.22■□□□□ 0.67
LMX1B-203ENST00000526117 DNM3Q9UQ16 869 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms