RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ATP2B1P20020 1258 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 ERVK-21P61565 698 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 SPIRE1Q08AE8 756 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 TBC1D8BQ0IIM8 1120 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 SAFBQ15424 915 aaKnown RBP eCLIP19.1■□□□□ 0.65
CCS-203ENST00000526058 NCAPH2Q6IBW4 605 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 ANO5Q75V66 913 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 SLFN12Q8IYM2 578 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 FAM184AQ8NB25 1140 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 FBXO18Q8NFZ0 1043 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 TBC1D32Q96NH3 1257 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 TGS1Q96RS0 853 aaKnown RBP19.1■□□□□ 0.65
CCS-203ENST00000526058 YME1L1Q96TA2 773 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 WRAP73Q9P2S5 460 aaPredicted RBP19.1■□□□□ 0.65
CCS-203ENST00000526058 CUL9Q8IWT3 2517 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 LPXNO60711 386 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 TMOD1P28289 359 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 QARSP47897 775 aaKnown RBP19.09■□□□□ 0.65
CCS-203ENST00000526058 CRYBB1P53674 252 aaPredicted RBP19.09■□□□□ 0.65
CCS-203ENST00000526058 NLRP11P59045 1033 aaKnown RBP19.09■□□□□ 0.65
CCS-203ENST00000526058 NFX1Q12986 1120 aaKnown RBP19.09■□□□□ 0.65
CCS-203ENST00000526058 GRB10Q13322 594 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 DRP2Q13474 957 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 EPHA7Q15375 998 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 CALCRLQ16602 461 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCS-203ENST00000526058 ZNF668Q96K58 619 aaPredicted RBP19.09■□□□□ 0.65
CCS-203ENST00000526058 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 C17orf80Q9BSJ5 609 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 FTHL17Q9BXU8 183 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 ERVK-5Q9HDB9 667 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 RGL1Q9NZL6 768 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 MTCH2Q9Y6C9 303 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 NLRC5Q86WI3 1866 aa19.09■□□□□ 0.65
CCS-203ENST00000526058 P4HBP07237 508 aaKnown RBP19.08■□□□□ 0.64
CCS-203ENST00000526058 PLA2G4FQ68DD2 849 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 MICALL1Q8N3F8 863 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 GDPD5Q8WTR4 605 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 TMX3Q96JJ7 454 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 TSPYL2Q9H2G4 693 aaPredicted RBP19.08■□□□□ 0.64
CCS-203ENST00000526058 ADAMTS10Q9H324 1103 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 PRDM6Q9NQX0 595 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 ST3GAL5Q9UNP4 418 aa19.08■□□□□ 0.64
CCS-203ENST00000526058 XIRP2A4UGR9 3374 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 MGEA5O60502 916 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 NEMFO60524 1076 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 POU3F3P20264 500 aaPredicted RBP19.07■□□□□ 0.64
CCS-203ENST00000526058 MCM7P33993 719 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 TXKP42681 527 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 NPEPPSP55786 919 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 CTTNQ14247 550 aaKnown RBP19.07■□□□□ 0.64
CCS-203ENST00000526058 FAM228AQ86W67 206 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 CRIPAKQ8N1N5 446 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 ZNF579Q8NAF0 562 aaKnown RBP19.07■□□□□ 0.64
CCS-203ENST00000526058 DYDC2Q96IM9 177 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 MTMR9Q96QG7 549 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 LXNQ9BS40 222 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 TMEM60Q9H2L4 133 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 FOXP1Q9H334 677 aaPredicted RBP19.07■□□□□ 0.64
CCS-203ENST00000526058 RC3H2Q9HBD1 1191 aaKnown RBP19.07■□□□□ 0.64
CCS-203ENST00000526058 PCDHA12Q9UN75 941 aa19.07■□□□□ 0.64
CCS-203ENST00000526058 COL4A6Q14031 1691 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 IGKV6-21A0A0C4DH24 114 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 ZBTB39O15060 712 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 GPR182O15218 404 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 MAFO75444 373 aaPredicted RBP19.06■□□□□ 0.64
CCS-203ENST00000526058 GPC3P51654 580 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 CYP4A11Q02928 519 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 TTC12Q9H892 705 aaPredicted RBP19.06■□□□□ 0.64
CCS-203ENST00000526058 CYP26B1Q9NR63 512 aa19.06■□□□□ 0.64
CCS-203ENST00000526058 GTPBP6O43824 516 aaPredicted RBP19.05■□□□□ 0.64
CCS-203ENST00000526058 DKC1O60832 514 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCS-203ENST00000526058 DGKIO75912 1065 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 SLITRK3O94933 977 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 IBSPP21815 317 aaPredicted RBP19.05■□□□□ 0.64
CCS-203ENST00000526058 GNL2Q13823 731 aaKnown RBP19.05■□□□□ 0.64
CCS-203ENST00000526058 ZNF174Q15697 407 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 EPC2Q52LR7 807 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 TPH2Q8IWU9 490 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 C4orf19Q8IY42 314 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 ZNF689Q96CS4 500 aaPredicted RBP19.05■□□□□ 0.64
CCS-203ENST00000526058 ADAM2Q99965 735 aa19.05■□□□□ 0.64
CCS-203ENST00000526058 EIF2AK1Q9BQI3 630 aaKnown RBP19.05■□□□□ 0.64
CCS-203ENST00000526058 ARID2Q68CP9 1835 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 EIF4BP23588 611 aaKnown RBP19.04■□□□□ 0.64
CCS-203ENST00000526058 YWHABP31946 246 aaKnown RBP19.04■□□□□ 0.64
CCS-203ENST00000526058 RALGAPA2Q2PPJ7 1873 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 ODR4Q5SWX8 454 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 NPAS4Q8IUM7 802 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 NOSTRINQ8IVI9 506 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 FIBCD1Q8N539 461 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 FBXO22Q8NEZ5 403 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 CEP170P1Q96L14 293 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 HSD17B14Q9BPX1 270 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 ZSWIM4Q9H7M6 989 aa19.04■□□□□ 0.64
CCS-203ENST00000526058 ADGRA3Q8IWK6 1321 aa19.03■□□□□ 0.64
CCS-203ENST00000526058 DENND3A2RUS2 1198 aa19.03■□□□□ 0.64
CCS-203ENST00000526058 POTEMA6NI47 508 aa19.03■□□□□ 0.64
CCS-203ENST00000526058 CSDE1O75534 798 aaKnown RBP19.03■□□□□ 0.64
CCS-203ENST00000526058 LINC00271P0C7V0 271 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms