RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 JADE2Q9NQC1 790 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 SLC4A7Q9Y6M7 1214 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 DNMBPQ6XZF7 1577 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 C4BPAP04003 597 aaKnown RBP5.34□□□□□ -1.55
CD44-219ENST00000525685 POU3F2P20265 443 aaPredicted RBP5.34□□□□□ -1.55
CD44-219ENST00000525685 AOAHP28039 575 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 KPNA1P52294 538 aaPredicted RBP5.34□□□□□ -1.55
CD44-219ENST00000525685 HERVK_113P62684 666 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 OCRLQ01968 901 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 PUM1Q14671 1186 aaKnown RBP eCLIP5.34□□□□□ -1.55
CD44-219ENST00000525685 SEC23AQ15436 765 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 GPR155Q7Z3F1 870 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 KIF18BQ86Y91 864 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 WDR48Q8TAF3 677 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 GPR101Q96P66 508 aaPredicted RBP5.34□□□□□ -1.55
CD44-219ENST00000525685 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 THG1LQ9NWX6 298 aaKnown RBP5.34□□□□□ -1.55
CD44-219ENST00000525685 BTBD7Q9P203 1132 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 ARHGAP28Q9P2N2 729 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
CD44-219ENST00000525685 TOPBP1Q92547 1522 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 TRAF5O00463 557 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 PTGS1P23219 599 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 POLD1P28340 1107 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 KIF11P52732 1056 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 ANAPC15P60006 121 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 TOP3AQ13472 1001 aaPredicted RBP5.33□□□□□ -1.56
CD44-219ENST00000525685 CDSNQ15517 529 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 PTPROQ16827 1216 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 DPP8Q6V1X1 898 aaPredicted RBP5.33□□□□□ -1.56
CD44-219ENST00000525685 KRT26Q7Z3Y9 468 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 NOSTRINQ8IVI9 506 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 ERCC4Q92889 916 aaPredicted RBP5.33□□□□□ -1.56
CD44-219ENST00000525685 TTC1Q99614 292 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 SEC61A2Q9H9S3 476 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 INCENPQ9NQS7 918 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 MCM8Q9UJA3 840 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 PTPN22Q9Y2R2 807 aa5.33□□□□□ -1.56
CD44-219ENST00000525685 hCG_2014768A0A024R1R8 64 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 ZNF891A8MT65 544 aaPredicted RBP5.32□□□□□ -1.56
CD44-219ENST00000525685 PATE3B3GLJ2 98 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 MATN3O15232 486 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 CUTAO60888 179 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 RAB11FIP3O75154 756 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 MPIG6BO95866 241 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 F2P00734 622 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 ZNF888P0CJ79 500 aaPredicted RBP5.32□□□□□ -1.56
CD44-219ENST00000525685 TNFRSF1AP19438 455 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 IL13RA1P78552 427 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 USP10Q14694 798 aaKnown RBP5.32□□□□□ -1.56
CD44-219ENST00000525685 FSTL4Q6MZW2 842 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 HIPK4Q8NE63 616 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 CARD11Q9BXL7 1154 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 KCNH7Q9NS40 1196 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 GALNT8Q9NY28 637 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 COL4A3BPQ9Y5P4 624 aa5.32□□□□□ -1.56
CD44-219ENST00000525685 FOXP2O15409 715 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 FKBP9O95302 570 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 SLC9A1P19634 815 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 MC4RP32245 332 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 DHCR24Q15392 516 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 STILQ15468 1287 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 SEPT7Q16181 437 aaKnown RBP5.31□□□□□ -1.56
CD44-219ENST00000525685 FKBP9P1Q75LS8 142 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 CXXC5Q7LFL8 322 aaKnown RBP5.31□□□□□ -1.56
CD44-219ENST00000525685 RNF180Q86T96 592 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 IFNL2Q8IZJ0 200 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 KIAA1958Q8N8K9 716 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 CHTF18Q8WVB6 975 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 AMNQ9BXJ7 453 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 KLC2Q9H0B6 622 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 ACSS2Q9NR19 701 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 OXSMQ9NWU1 459 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 TSC22D4Q9Y3Q8 395 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 CUX1P39880 1505 aa5.31□□□□□ -1.56
CD44-219ENST00000525685 ABCC8Q09428 1581 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 BRINP1O60477 761 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 MMEP08473 750 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 ATP2A2P16615 1042 aaKnown RBP5.3□□□□□ -1.56
CD44-219ENST00000525685 ETV4P43268 484 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 MECP2P51608 486 aaKnown RBP5.3□□□□□ -1.56
CD44-219ENST00000525685 IGBP1P78318 339 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 WDR72Q3MJ13 1102 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 ATP13A4Q4VNC1 1196 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 OTOP1Q7RTM1 612 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 SCYL1Q96KG9 808 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 GBP4Q96PP9 640 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 LMF1Q96S06 567 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 ZDHHC5Q9C0B5 715 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 B3GALT1Q9Y5Z6 326 aa5.3□□□□□ -1.56
CD44-219ENST00000525685 POLA1P09884 1462 aaPredicted RBP5.29□□□□□ -1.56
CD44-219ENST00000525685 FGD5Q6ZNL6 1462 aa5.29□□□□□ -1.56
CD44-219ENST00000525685 ZEB2O60315 1214 aa5.29□□□□□ -1.56
CD44-219ENST00000525685 ZNF623O75123 536 aa5.29□□□□□ -1.56
CD44-219ENST00000525685 CYP17A1P05093 508 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms