RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 HIP1RO75146 1068 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 SLITRK3O94933 977 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 GUCY2CP25092 1073 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 PSMC2P35998 433 aaKnown RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 IREB2P48200 963 aaKnown RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 KIF11P52732 1056 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 DGKZQ13574 1117 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 WHAMMP3Q1A5X7 153 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 IQCEQ6IPM2 695 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 GBP6Q6ZN66 633 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 EPM2AIP1Q7L775 607 aaPredicted RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 VPS36Q86VN1 386 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 FMNL3Q8IVF7 1028 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 TRIM59Q8IWR1 403 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 FAM186BQ8IYM0 893 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 RDM1Q8NG50 284 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 IL31RAQ8NI17 732 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 CAGE1Q8TC20 777 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 NSUN6Q8TEA1 469 aaKnown RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 ATP6V0A1Q93050 837 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 GPRASP2Q96D09 838 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 IWS1Q96ST2 819 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 CHP1Q99653 195 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 ARID3AQ99856 593 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 FGFBP2Q9BYJ0 223 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 DBR1Q9UK59 544 aaKnown RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 ZNFX1Q9P2E3 1918 aaKnown RBP11.81□□□□□ -0.52
SPIDR-222ENST00000524006 ASTN1O14525 1302 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 SIP14410 1827 aa11.81□□□□□ -0.52
SPIDR-222ENST00000524006 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 TACC1O75410 805 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 STAM2O75886 525 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 SLC34A2O95436 690 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 SERPING1P05155 500 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 ITGB5P18084 799 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 CASP5P51878 434 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 VAV2P52735 878 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 POLR2FP61218 127 aaKnown RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 PSMC5P62195 406 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 MLLT1Q03111 559 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 KCNH2Q12809 1159 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 PRKG1Q13976 671 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 BAATQ14032 418 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 TTLL12Q14166 644 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 GLIPR1L2Q4G1C9 344 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 RGMBQ6NW40 437 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 C1orf186Q6ZWK4 172 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 ZC3H3Q8IXZ2 948 aaKnown RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 ACCSQ96QU6 501 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 PDCD2LQ9BRP1 358 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 MKNK1Q9BUB5 465 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 MAF1Q9H063 256 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 TMEM206Q9H813 350 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-222ENST00000524006 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 HOXC10Q9NYD6 342 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 EXOC7Q9UPT5 735 aa11.8□□□□□ -0.52
SPIDR-222ENST00000524006 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 RNF225M0QZC1 329 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 N4BP1O75113 896 aaKnown RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 TADA3O75528 432 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 PSAPP07602 524 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 NMT1P30419 496 aaKnown RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 HNRNPH3P31942 346 aaKnown RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 EIF4A3P38919 411 aaKnown RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 CYP2J2P51589 502 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 NAP1L1P55209 391 aaKnown RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 CHMP4BP1P59074 171 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 HERVK_113P62684 666 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 CETN1Q12798 172 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 EXOC3L4Q17RC7 722 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 XKR9Q5GH70 373 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 CCDC70Q6NSX1 233 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 ZNF746Q6NUN9 644 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 GADL1Q6ZQY3 521 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 ZNF710Q8N1W2 664 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-222ENST00000524006 GCNT4Q9P109 453 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 PLAGL2Q9UPG8 496 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 PFASO15067 1338 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
SPIDR-222ENST00000524006 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
SPIDR-222ENST00000524006 MACROD2A1Z1Q3 448 aa11.78□□□□□ -0.52
SPIDR-222ENST00000524006 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
SPIDR-222ENST00000524006 SFI1A8K8P3 1242 aa11.78□□□□□ -0.52
SPIDR-222ENST00000524006 CLIC2O15247 247 aa11.78□□□□□ -0.52
SPIDR-222ENST00000524006 MAFGO15525 162 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms