RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 BAIAP3O94812 1187 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 CYP2C9P11712 490 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 MYOGP15173 224 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 FSTP19883 344 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 MCCP23508 829 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 ALDH5A1P51649 535 aaPredicted RBP7.32□□□□□ -1.24
PABPC1-220ENST00000522658 KCNQ1P51787 676 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 TTLL4Q14679 1199 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 LCE3BQ5TA77 95 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 KCTD1Q719H9 257 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 PHOSPHO2Q8TCD6 241 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 MKL1Q969V6 931 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 WDR11Q9BZH6 1224 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 WNT8AQ9H1J5 351 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 TRMT13Q9NUP7 481 aaKnown RBP7.32□□□□□ -1.24
PABPC1-220ENST00000522658 CYP39A1Q9NYL5 469 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 ZMIZ1Q9ULJ6 1067 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
PABPC1-220ENST00000522658 GREB1LQ9C091 1923 aaPredicted RBP7.32□□□□□ -1.24
PABPC1-220ENST00000522658 LOC102724159A0A0B4J2E5 919 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 PATL2C9JE40 543 aaKnown RBP7.31□□□□□ -1.24
PABPC1-220ENST00000522658 TNFRSF10BO14763 440 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 SMARCA5O60264 1052 aaPredicted RBP7.31□□□□□ -1.24
PABPC1-220ENST00000522658 EFCAB14O75071 495 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 ICAM1P05362 532 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 RFX1P22670 979 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 CALML3P27482 149 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 PPARAQ07869 468 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 ELOAQ14241 798 aaKnown RBP7.31□□□□□ -1.24
PABPC1-220ENST00000522658 PWP2Q15269 919 aaKnown RBP7.31□□□□□ -1.24
PABPC1-220ENST00000522658 DUSP28Q4G0W2 176 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 RRP12Q5JTH9 1297 aaKnown RBP7.31□□□□□ -1.24
PABPC1-220ENST00000522658 C16orf46Q6P387 395 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 NFRKBQ6P4R8 1299 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 IFNL3Q8IZI9 196 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 OR13H1Q8NG92 308 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 CAGE1Q8TC20 777 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 SCFD2Q8WU76 684 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 DCAF4Q8WV16 495 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 OSBP2Q969R2 916 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 FGD4Q96M96 766 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 UIMC1Q96RL1 719 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 EPB41L4AQ9HCS5 686 aaPredicted RBP7.31□□□□□ -1.24
PABPC1-220ENST00000522658 PDGFCQ9NRA1 345 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 FAM50BQ9Y247 325 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 MTCH2Q9Y6C9 303 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 MCM3APO60318 1980 aa7.31□□□□□ -1.24
PABPC1-220ENST00000522658 ASTN1O14525 1302 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 M0R2C6 588 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 PLA2G6O60733 806 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 PARNO95453 639 aaKnown RBP7.3□□□□□ -1.24
PABPC1-220ENST00000522658 CHGBP05060 677 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 BRD2P25440 801 aaKnown RBP7.3□□□□□ -1.24
PABPC1-220ENST00000522658 SNAP25P60880 206 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 NKX3-2P78367 333 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 PURAQ00577 322 aaKnown RBP7.3□□□□□ -1.24
PABPC1-220ENST00000522658 PTPN11Q06124 597 aaPredicted RBP7.3□□□□□ -1.24
PABPC1-220ENST00000522658 MUM1L1Q5H9M0 696 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 SYDE2Q5VT97 1194 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 RCSD1Q6JBY9 416 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 RNF207Q6ZRF8 634 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.3□□□□□ -1.24
PABPC1-220ENST00000522658 HERC6Q8IVU3 1022 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 GALNT11Q8NCW6 608 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 AFAP1L1Q8TED9 768 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 GDPD5Q8WTR4 605 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 KATNAL1Q9BW62 490 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 KATNBL1Q9H079 304 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 RBSNQ9H1K0 784 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 ZBTB40Q9NUA8 1239 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 MTUS1Q9ULD2 1270 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 GBF1Q92538 1859 aa7.3□□□□□ -1.24
PABPC1-220ENST00000522658 RFXAPO00287 272 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 CTAGE5O15320 804 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 DHX16O60231 1041 aaKnown RBP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 PRMT3O60678 531 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 TXNP10599 105 aaKnown RBP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 CD97P48960 835 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 BAATQ14032 418 aaPredicted RBP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 PTGISQ16647 500 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 PTPROQ16827 1216 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 TSHZ3Q63HK5 1081 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 TAPT1Q6NXT6 567 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 CNKSR3Q6P9H4 555 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 DHX37Q8IY37 1157 aaKnown RBP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 AGGF1Q8N302 714 aaeCLIP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 C7orf31Q8N865 590 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 DNERQ8NFT8 737 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 UBL7Q96S82 380 aaPredicted RBP7.29□□□□□ -1.24
PABPC1-220ENST00000522658 LRFN3Q9BTN0 628 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 MUC3BQ9H195 1237 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 CTNNA3Q9UI47 895 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 PPME1Q9Y570 386 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms