RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ALKBH5Q6P6C2 394 aaKnown RBP17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 PPP1R13BQ96KQ4 1090 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 FNDC3AQ9Y2H6 1198 aaKnown RBP17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 SAMSN1Q9NSI8 373 aaKnown RBP17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 ADAM22Q9P0K1 906 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 STRIP2Q9ULQ0 834 aa17.46■□□□□ 0.39
PCDHA3-201ENST00000522353 SLC16A4O15374 487 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 NMT2O60551 498 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 NR3C1P04150 777 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 TBXAS1P24557 533 aaPredicted RBP17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 ZNF157P51786 506 aaPredicted RBP17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 MIPOL1Q8TD10 442 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 RAD54LQ92698 747 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 HAUS8Q9BT25 410 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 ZFYVE28Q9HCC9 887 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 MID2Q9UJV3 735 aa17.46■□□□□ 0.38
PCDHA3-201ENST00000522353 MSH2P43246 934 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 COG7P83436 770 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 BAIAP2L1Q9UHR4 511 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 STAP1Q9ULZ2 295 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 SNX1Q13596 522 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 DBN1Q16643 649 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 MMEL1Q495T6 779 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 C12orf60Q5U649 245 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 MB21D2Q8IYB1 491 aaPredicted RBP17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 DHX38Q92620 1227 aaKnown RBP17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 LY9Q9HBG7 655 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 IRAK4Q9NWZ3 460 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 GDAQ9Y2T3 454 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 DAGLAQ9Y4D2 1042 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 TXNP10599 105 aaKnown RBP17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 FOXO4P98177 505 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 MTMR2Q13614 643 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 TFDP2Q14188 446 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 VPS39Q96JC1 886 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 SLC9A2Q9UBY0 812 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 IL9RQ01113 521 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 TMTC4Q5T4D3 741 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 DCLK2Q8N568 766 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 FAM213AQ9BRX8 229 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 HPCAL4Q9UM19 191 aa17.45■□□□□ 0.38
PCDHA3-201ENST00000522353 EFNA5P52803 228 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 VEPH1Q14D04 833 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 ZNF280CQ8ND82 737 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 LARGE1O95461 756 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 ATP1A2P50993 1020 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 RWDD2BP57060 319 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 KRT33BQ14525 404 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 CDO1Q16878 200 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 TCP11X2Q5H9J9 407 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 GAS2L3Q86XJ1 694 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 ZSCAN26Q16670 478 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 PDIK1LQ8N165 341 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 POLR3FQ9H1D9 316 aaPredicted RBP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 NHEJ1Q9H9Q4 299 aaPredicted RBP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 DNAJC12Q9UKB3 198 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 CALB1P05937 261 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 STYK1Q6J9G0 422 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 PCGF5Q86SE9 256 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 ZNF560Q96MR9 790 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 LXNQ9BS40 222 aa17.44■□□□□ 0.38
PCDHA3-201ENST00000522353 KBTBD13C9JR72 458 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 E9PMD0 336 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 AP3M2P53677 418 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 CLNS1AP54105 237 aaKnown RBP17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 EPHB4P54760 987 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 EPHA7Q15375 998 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 ZNF394Q53GI3 561 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 ZNF34Q8IZ26 560 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 KATNAL1Q9BW62 490 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 CEP55Q53EZ4 464 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 OR6J1Q8NGC5 347 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 ASNSD1Q9NWL6 643 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 ATP8B1O43520 1251 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 ACAP3Q96P50 834 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 POTECB2RU33 542 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 PLTPP55058 493 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 CEP120Q8N960 986 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 BCAS4Q8TDM0 211 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 SDCCAG3Q96C92 435 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 TRIM62Q9BVG3 475 aa17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 JPH1Q9HDC5 661 aaPredicted RBP17.43■□□□□ 0.38
PCDHA3-201ENST00000522353 ENC1O14682 589 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 CLGNO14967 610 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 HIP1RO75146 1068 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms